Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038608.1-P | Field mustard | nucleus | 98.41 | 95.88 |
| CDX84387 | Canola | nucleus | 94.71 | 91.33 |
| AT5G63130.2 | Thale cress | nucleus | 83.6 | 82.29 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 80.95 | 80.1 |
| CDY72321 | Canola | plastid | 74.6 | 78.77 |
| CDY39571 | Canola | plastid | 61.38 | 63.39 |
| CDY48161 | Canola | plastid | 60.85 | 62.84 |
| KRH54323 | Soybean | cytosol, nucleus, plastid | 48.68 | 49.46 |
| KRH63619 | Soybean | plastid | 49.21 | 47.94 |
| VIT_17s0000g09190.t01 | Wine grape | cytosol, nucleus, plastid | 40.21 | 47.8 |
| CDY66304 | Canola | cytosol | 38.62 | 43.98 |
| CDY61217 | Canola | cytosol, mitochondrion | 38.62 | 43.98 |
| PGSC0003DMT400069641 | Potato | mitochondrion | 40.21 | 43.93 |
| CDX83621 | Canola | mitochondrion | 41.8 | 43.65 |
| KRH03222 | Soybean | cytosol | 45.5 | 43.43 |
| CDY28543 | Canola | plastid | 40.21 | 43.18 |
| CDY48987 | Canola | plastid | 40.21 | 42.46 |
| Solyc06g071750.2.1 | Tomato | plastid | 41.27 | 40.41 |
| PGSC0003DMT400046652 | Potato | plastid | 42.33 | 40.4 |
| CDY13638 | Canola | mitochondrion | 38.1 | 39.78 |
| CDY20093 | Canola | extracellular, plasma membrane | 38.62 | 37.63 |
| CDY21444 | Canola | mitochondrion | 30.69 | 21.97 |
| CDX83177 | Canola | mitochondrion | 30.16 | 21.43 |
| CDX91540 | Canola | nucleus | 31.75 | 21.28 |
| CDY16375 | Canola | nucleus | 31.75 | 21.28 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 26.45 | 19.3 |
| CDY24410 | Canola | cytosol | 25.4 | 18.6 |
| CDY31319 | Canola | nucleus | 26.98 | 18.28 |
| CDY62874 | Canola | nucleus | 28.04 | 13.35 |
| CDY46377 | Canola | nucleus | 27.51 | 13.13 |
| CDX91230 | Canola | nucleus | 28.57 | 12.22 |
| CDX97304 | Canola | nucleus | 28.57 | 12.16 |
| CDY46804 | Canola | nucleus | 29.63 | 11.76 |
| CDX84525 | Canola | nucleus | 29.63 | 11.55 |
| CDY58263 | Canola | nucleus | 29.1 | 11.48 |
| CDX69896 | Canola | nucleus | 28.04 | 11.28 |
| CDY21590 | Canola | nucleus | 28.04 | 11.16 |
| CDX78676 | Canola | plastid | 24.87 | 10.47 |
| CDX70680 | Canola | plastid | 24.87 | 10.2 |
| CDY25942 | Canola | nucleus, plastid | 31.75 | 9.55 |
| CDX69461 | Canola | plastid | 24.34 | 9.48 |
| CDY40994 | Canola | cytosol | 28.04 | 9.3 |
| CDY24442 | Canola | cytosol | 28.04 | 9.28 |
| CDX92217 | Canola | cytosol | 28.57 | 9.22 |
| CDY41073 | Canola | nucleus, plastid | 30.69 | 9.19 |
| CDY68695 | Canola | nucleus | 26.45 | 9.09 |
| CDY17690 | Canola | nucleus, plastid | 32.28 | 8.43 |
| CDY66514 | Canola | nucleus | 26.45 | 7.76 |
Protein Annotations
| EnsemblPlants:CDY41501 | EnsemblPlantsGene:GSBRNA2T00073113001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF10 | PFAM:PF00564 | ProteinID:CDY41501 |
| ProteinID:CDY41501.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EE5DBC | UniProt:A0A078HUV8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA06g22540DBnaA06g22540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUV8]
Coordinates
chrLK032499:+:10876..11609
Molecular Weight (calculated)
20965.8 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.499
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAVDVNEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVHRSI SFEELMKKLF EFCGYSVDLR CQLPNGDLET LISVKSDEDL ANIVEEYDRV
101: SGAKIRAVLS PPRAHRQGSP SSSSSDLSPK SPFAVTPSPP NSPSSAYGRY VQSRYCLPPT DLGRRYIHGY GESYCYACRG HKDSRLIRH
101: SGAKIRAVLS PPRAHRQGSP SSSSSDLSPK SPFAVTPSPP NSPSSAYGRY VQSRYCLPPT DLGRRYIHGY GESYCYACRG HKDSRLIRH
001: MVAVDYTEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVDRSI SFSELMKKLY EFCGYSVDLR CQLPNGDLET LISVKSEEEL AEIVEEYDRI
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH
Arabidopsis Description
At5g63130 [Source:UniProtKB/TrEMBL;Acc:Q9FML0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.