Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83177 | Canola | mitochondrion | 95.08 | 94.36 |
| CDY16375 | Canola | nucleus | 81.82 | 76.6 |
| CDX91540 | Canola | nucleus | 81.06 | 75.89 |
| AT5G49920.1 | Thale cress | nucleus | 77.27 | 70.83 |
| KRH26304 | Soybean | nucleus | 43.56 | 44.06 |
| KRH06059 | Soybean | nucleus | 43.94 | 43.28 |
| CDY48987 | Canola | plastid | 24.24 | 35.75 |
| CDY28543 | Canola | plastid | 23.48 | 35.23 |
| CDY66304 | Canola | cytosol | 21.97 | 34.94 |
| CDX83621 | Canola | mitochondrion | 23.86 | 34.81 |
| CDY61217 | Canola | cytosol, mitochondrion | 21.59 | 34.34 |
| CDY13638 | Canola | mitochondrion | 23.11 | 33.7 |
| PGSC0003DMT400097584 | Potato | nucleus | 46.59 | 33.42 |
| CDY72321 | Canola | plastid | 21.21 | 31.28 |
| VIT_12s0035g01050.t01 | Wine grape | extracellular, golgi | 45.45 | 31.01 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 22.35 | 30.89 |
| CDY41501 | Canola | cytosol | 21.97 | 30.69 |
| CDY39571 | Canola | plastid | 21.21 | 30.6 |
| CDY48161 | Canola | plastid | 20.83 | 30.05 |
| CDY20093 | Canola | extracellular, plasma membrane | 21.59 | 29.38 |
| CDX84387 | Canola | nucleus | 21.59 | 29.08 |
| GSMUA_Achr11P... | Banana | plastid | 29.55 | 25.41 |
| GSMUA_Achr3P21900_001 | Banana | nucleus | 34.47 | 24.73 |
| TraesCS1A01G266900.1 | Wheat | nucleus | 32.2 | 23.29 |
| TraesCS1D01G267100.1 | Wheat | nucleus | 32.2 | 23.22 |
| CDY31319 | Canola | nucleus | 23.86 | 22.58 |
| Os05t0427100-01 | Rice | cytosol | 31.06 | 22.4 |
| OQU78054 | Sorghum | cytosol | 31.06 | 22.4 |
| Zm00001d010214_P003 | Maize | cytosol | 31.44 | 21.17 |
| TraesCS1B01G277800.1 | Wheat | cytosol, mitochondrion | 32.2 | 20.94 |
| HORVU1Hr1G065470.6 | Barley | mitochondrion | 32.2 | 19.59 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 18.94 | 19.3 |
| CDY24410 | Canola | cytosol | 18.56 | 18.99 |
| CDY46377 | Canola | nucleus | 23.48 | 15.66 |
| CDY62874 | Canola | nucleus | 23.48 | 15.62 |
| CDX84525 | Canola | nucleus | 28.03 | 15.26 |
| CDY58263 | Canola | nucleus | 27.65 | 15.24 |
| CDX91230 | Canola | nucleus | 25.38 | 15.16 |
| CDX97304 | Canola | nucleus | 25.38 | 15.09 |
| CDY46804 | Canola | nucleus | 26.89 | 14.92 |
| CDX69896 | Canola | nucleus | 24.62 | 13.83 |
| CDY21590 | Canola | nucleus | 24.62 | 13.68 |
| CDX78676 | Canola | plastid | 20.08 | 11.8 |
| CDX70680 | Canola | plastid | 20.08 | 11.5 |
| CDY40994 | Canola | cytosol | 24.62 | 11.4 |
| CDY24442 | Canola | cytosol | 24.62 | 11.38 |
| CDY68695 | Canola | nucleus | 23.11 | 11.09 |
| CDX69461 | Canola | plastid | 20.08 | 10.93 |
| CDX92217 | Canola | cytosol | 24.24 | 10.92 |
| CDY25942 | Canola | nucleus, plastid | 24.24 | 10.19 |
| CDY41073 | Canola | nucleus, plastid | 23.11 | 9.67 |
| CDY66514 | Canola | nucleus | 23.48 | 9.63 |
| CDY17690 | Canola | nucleus, plastid | 25.0 | 9.12 |
Protein Annotations
| EnsemblPlants:CDY21444 | EnsemblPlantsGene:GSBRNA2T00015842001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF13 | PFAM:PF00564 | ProteinID:CDY21444 |
| ProteinID:CDY21444.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EE8498 | UniProt:A0A078G7Q2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g27530DBnaC03g27530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7Q2]
Coordinates
chrLK032121:+:98041..99281
Molecular Weight (calculated)
29702.2 Da
IEP (calculated)
9.234
GRAVY (calculated)
-0.744
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIGGRSKVK FMCSFGGKIL PRPSDGLLKY VGGETRVIAV SPDITFVELT KKLTEMTESD MVLKYQIIPE DLDALVSVKS DEDLKHMMDE YNRHQETPKL
101: RTFLFPAVQL GSPIEPQTIE QRYIEAINGI LRKTRPSFTL SASSSPKSES SPDGYGNGNE QPEMGSYQLS RLYPMHRVRS SPNISQQSQQ PHNYHHHSAY
201: FQPPNYLTCR LRPPPPPPLD FPRGAGWGDP QGGGNGKYGC NEERRFWGRA SSVPHSPRNH GFRL
101: RTFLFPAVQL GSPIEPQTIE QRYIEAINGI LRKTRPSFTL SASSSPKSES SPDGYGNGNE QPEMGSYQLS RLYPMHRVRS SPNISQQSQQ PHNYHHHSAY
201: FQPPNYLTCR LRPPPPPPLD FPRGAGWGDP QGGGNGKYGC NEERRFWGRA SSVPHSPRNH GFRL
001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
Arabidopsis Description
At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.