Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26304 | Soybean | nucleus | 79.48 | 81.61 |
| CDY21444 | Canola | mitochondrion | 43.28 | 43.94 |
| AT5G49920.1 | Thale cress | nucleus | 46.64 | 43.4 |
| Bra000599.1-P | Field mustard | mitochondrion | 42.91 | 43.4 |
| CDX83177 | Canola | mitochondrion | 42.91 | 43.23 |
| CDX91540 | Canola | nucleus | 42.54 | 40.43 |
| Bra022508.1-P | Field mustard | nucleus | 42.16 | 40.07 |
| CDY16375 | Canola | nucleus | 42.16 | 40.07 |
| KRH29762 | Soybean | plastid | 16.04 | 36.13 |
| KRH57272 | Soybean | cytosol | 12.31 | 35.87 |
| PGSC0003DMT400097584 | Potato | nucleus | 46.27 | 33.7 |
| KRH45586 | Soybean | plastid | 22.76 | 33.52 |
| KRH54323 | Soybean | cytosol, nucleus, plastid | 21.64 | 31.18 |
| KRH69636 | Soybean | plastid | 24.63 | 31.13 |
| KRH63619 | Soybean | plastid | 22.39 | 30.93 |
| VIT_12s0035g01050.t01 | Wine grape | extracellular, golgi | 43.66 | 30.23 |
| KRH74522 | Soybean | nucleus | 24.63 | 28.57 |
| KRH03222 | Soybean | cytosol | 20.52 | 27.78 |
| GSMUA_Achr3P21900_001 | Banana | nucleus | 37.31 | 27.17 |
| GSMUA_Achr11P... | Banana | plastid | 29.48 | 25.73 |
| TraesCS1A01G266900.1 | Wheat | nucleus | 32.46 | 23.84 |
| TraesCS1D01G267100.1 | Wheat | nucleus | 32.46 | 23.77 |
| Os05t0427100-01 | Rice | cytosol | 31.72 | 23.22 |
| OQU78054 | Sorghum | cytosol | 30.97 | 22.68 |
| TraesCS1B01G277800.1 | Wheat | cytosol, mitochondrion | 32.46 | 21.43 |
| Zm00001d010214_P003 | Maize | cytosol | 30.97 | 21.17 |
| HORVU1Hr1G065470.6 | Barley | mitochondrion | 32.09 | 19.82 |
| KRH16903 | Soybean | nucleus | 22.01 | 16.67 |
| KRH72507 | Soybean | cytosol, nucleus, peroxisome | 22.01 | 16.43 |
| KRH41951 | Soybean | nucleus | 25.75 | 16.39 |
| KRH49930 | Soybean | nucleus | 25.37 | 16.04 |
| KRH21700 | Soybean | nucleus | 25.37 | 15.45 |
| KRH10652 | Soybean | cytosol | 25.37 | 15.25 |
| KRH42038 | Soybean | cytosol | 25.0 | 14.08 |
| KRH49860 | Soybean | nucleus | 23.88 | 13.53 |
| KRH38173 | Soybean | nucleus | 28.73 | 11.81 |
| KRH48572 | Soybean | cytosol | 26.12 | 10.92 |
| KRH39133 | Soybean | cytosol | 26.49 | 10.61 |
| KRH35888 | Soybean | nucleus | 27.24 | 10.33 |
| KRG90906 | Soybean | nucleus, plastid | 27.61 | 10.26 |
Protein Annotations
| EMBL:ACUP02009815 | EnsemblPlants:KRH06059 | EnsemblPlantsGene:GLYMA_16G002600 | EntrezGene:100800353 | Gene3D:3.10.20.90 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF13 |
| PFAM:PF00564 | ProteinID:KRH06059 | ProteinID:KRH06059.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 |
| UniParc:UPI000233B633 | UniProt:I1MJU8 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:139859..140744
Molecular Weight (calculated)
30261.7 Da
IEP (calculated)
9.222
GRAVY (calculated)
-0.720
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDESPRNKV KFLCSYGGKV LPRPSDGLLR YVGGETRVVS VPREITFPEL MKKVSSMVEG VGDMVLKYQL IPEDLDALVS VRTEEDVKHM IEEHDRHHTG
101: ALLRAFLFPP SKQTGLVACE PYLLEQRYID AINGIIRASP RKGSACSSPK SNSPDASPRF SNSNSLHRVQ SSPTLTDLGV FLDHQHQGQQ QQYHHPNFHF
201: SRPPQDPQRL GAGRVPSFNY HYSNITRQLT HRGDRGGGYA YYDDSPPSYA HDRIHSVSRS PRRKSIWE
101: ALLRAFLFPP SKQTGLVACE PYLLEQRYID AINGIIRASP RKGSACSSPK SNSPDASPRF SNSNSLHRVQ SSPTLTDLGV FLDHQHQGQQ QQYHHPNFHF
201: SRPPQDPQRL GAGRVPSFNY HYSNITRQLT HRGDRGGGYA YYDDSPPSYA HDRIHSVSRS PRRKSIWE
001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
Arabidopsis Description
At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.