Factsheet for HORVU1Hr1G065470.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G267100.1	Wheat	nucleus	77.65	92.08
TraesCS1A01G266900.1	Wheat	nucleus	77.42	92.05
TraesCS1B01G277800.1	Wheat	cytosol, mitochondrion	80.18	85.71
Os05t0427100-01	Rice	cytosol	55.3	65.57
OQU78054	Sorghum	cytosol	51.61	61.2
Zm00001d010214_P003	Maize	cytosol	53.0	58.67
CDY21444	Canola	mitochondrion	19.59	32.2
KRH06059	Soybean	nucleus	19.82	32.09
Bra000599.1-P	Field mustard	mitochondrion	19.59	32.08
CDX83177	Canola	mitochondrion	19.59	31.95
KRH26304	Soybean	nucleus	19.12	31.8
GSMUA_Achr11P...	Banana	plastid	21.66	30.62
Bra022508.1-P	Field mustard	nucleus	19.35	29.79
CDX91540	Canola	nucleus	19.35	29.79
CDY16375	Canola	nucleus	19.35	29.79
AT5G49920.1	Thale cress	nucleus	19.59	29.51
GSMUA_Achr3P21900_001	Banana	nucleus	24.65	29.08
VIT_12s0035g01050.t01	Wine grape	extracellular, golgi	23.73	26.61
PGSC0003DMT400097584	Potato	nucleus	21.66	25.54
HORVU3Hr1G008310.1	Barley	cytosol	7.6	23.08
HORVU6Hr1G055230.3	Barley	cytosol	12.21	22.75
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	12.21	17.85
HORVU2Hr1G041600.1	Barley	mitochondrion	10.83	15.56
HORVU4Hr1G026270.1	Barley	cytosol	11.52	15.15
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	16.36	12.89
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	17.97	9.22
HORVU3Hr1G064760.1	Barley	cytosol	2.76	6.19

Protein Annotations

EnsemblPlants:HORVU1Hr1G065470.6	EnsemblPlantsGene:HORVU1Hr1G065470	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF8	PFAM:PF00564	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	UniParc:UPI000295C7AD	UniProt:M0YTT0	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr1H:-:467483134..467485685

Molecular Weight (calculated)

46994.8 Da

IEP (calculated)

9.814

GRAVY (calculated)

-0.464

Length

434 amino acids

Sequence
(BLAST)

001: MRIDQTWRHL LKRRMLLRRS IQYSADSLRA RHIPLPSIEQ EMEHAMPTMT AESEGGATTD DDVHLSPTSV SSGGGGGGGG APSVRFKILC SFGGRIMPRP
101: SDGALKYIGG DTRVLAVPRS IRFRGTYAVS VHPCLVDARV FLVASMSRRA QICSPPRADL KKKVEEMFKT DVAAIKYQLL SSDDLDVLVS VTCDEDLGHM
201: LDEYDRFEAK RSPSASPRFR VYVFVPHQVS AAVAAPVPSS RHVSYARSQP HYHHQHHHLQ PERERYVASV PGTPDGSPPY PDQPNGIVSA GNSPRANIVE
301: QAVFRGGMQR VRSSPNLGGL NAAPQAFHDH AGDSPGGLAG YMSSSPVHPG GGHMFSQGNY NPYRSPQPQY SPAPVPVPVP VAGRYDARGG YARGGSYMAA
401: PMVPALRSGR PVTRSGGAPY SEMQTPKKAA TIWD

Best Arabidopsis Sequence Match ( AT5G49920.1 )
(BLAST)

001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL

Arabidopsis Description

At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.