Factsheet for HORVU3Hr1G008310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G073190.1
HORVU6Hr1G093960.1
HORVU7Hr1G011400.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01190.1	HORVU3Hr1G073190.1	AT3G16120.1	21798944
AT2G01190.1	HORVU7Hr1G011400.2	AT3G16120.1	21798944
AT2G01190.1	HORVU6Hr1G093960.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003965_P001	Maize	mitochondrion	40.56	52.73
GSMUA_Achr10P...	Banana	nucleus	65.73	27.81
GSMUA_AchrUn_...	Banana	nucleus	69.93	25.91
TraesCS3B01G060500.1	Wheat	cytosol	95.8	20.69
TraesCS3D01G050900.1	Wheat	nucleus	95.8	20.66
TraesCS3A01G051800.1	Wheat	nucleus	97.2	19.74
EES00348	Sorghum	nucleus	90.21	19.46
Zm00001d039916_P010	Maize	nucleus	89.51	19.42
Zm00001d008591_P001	Maize	mitochondrion	88.81	19.1
Os01t0139200-01	Rice	nucleus	89.51	19.08
GSMUA_Achr8P18320_001	Banana	nucleus	67.13	18.53
GSMUA_Achr2P07240_001	Banana	nucleus	67.83	17.64
HORVU2Hr1G041600.1	Barley	mitochondrion	37.06	17.55
CDY36115	Canola	cytosol, nucleus, vacuole	31.47	17.37
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	30.77	16.92
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	98.6	16.67
CDY24410	Canola	cytosol	30.07	16.67
GSMUA_Achr1P21240_001	Banana	nucleus	69.23	16.5
AT1G25300.1	Thale cress	cytosol, nucleus, plasma membrane	30.07	15.81
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	70.63	14.43
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	29.37	14.14
Bra006344.1-P	Field mustard	plastid	34.97	14.08
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	67.13	13.66
CDY68695	Canola	nucleus	46.85	12.18
Solyc02g086360.2.1	Tomato	cytosol	46.85	12.03
HORVU6Hr1G055230.3	Barley	cytosol	19.58	12.02
Bra022297.1-P	Field mustard	nucleus	47.55	11.87
PGSC0003DMT400067817	Potato	cytosol	46.15	11.85
VIT_17s0000g03180.t01	Wine grape	nucleus	52.45	11.76
CDY40994	Canola	cytosol	46.85	11.75
VIT_14s0006g02490.t01	Wine grape	nucleus	42.66	11.75
CDY24442	Canola	cytosol	46.85	11.73
CDX92217	Canola	cytosol	47.55	11.6
Bra022296.1-P	Field mustard	cytosol	47.55	11.49
CDX78676	Canola	plastid	35.66	11.36
Solyc03g118870.2.1	Tomato	nucleus	50.35	11.3
CDX70680	Canola	plastid	35.66	11.06
KRH48572	Soybean	cytosol	48.95	10.92
KRH39133	Soybean	cytosol	51.05	10.91
HORVU4Hr1G026270.1	Barley	cytosol	25.17	10.91
PGSC0003DMT400015310	Potato	nucleus	49.65	10.77
KRH35888	Soybean	nucleus	53.15	10.75
Solyc05g008830.2.1	Tomato	nucleus	47.55	10.58
PGSC0003DMT400014442	Potato	nucleus	50.35	10.51
AT5G16220.1	Thale cress	plastid	34.97	10.5
VIT_01s0011g04140.t01	Wine grape	nucleus	51.05	10.47
Bra037596.1-P	Field mustard	nucleus	46.85	10.42
Solyc04g007460.2.1	Tomato	plastid	49.65	10.41
CDY66514	Canola	nucleus	46.85	10.4
KRG90906	Soybean	nucleus, plastid	52.45	10.4
Bra017462.1-P	Field mustard	cytosol, plastid	45.45	10.12
CDY25942	Canola	nucleus, plastid	44.06	10.03
AT3G18230.1	Thale cress	nucleus, plastid	46.15	9.91
AT2G01190.1	Thale cress	nucleus, plastid	49.65	9.86
CDY41073	Canola	nucleus, plastid	43.36	9.83
Bra024899.1-P	Field mustard	nucleus, plastid	49.65	9.78
CDY17690	Canola	nucleus, plastid	48.95	9.67
Bra008633.1-P	Field mustard	plastid	32.17	9.48
CDX69461	Canola	plastid	32.17	9.48
KRH38173	Soybean	nucleus	40.56	8.9
HORVU3Hr1G064760.1	Barley	cytosol	11.19	8.25
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	29.37	7.62
HORVU1Hr1G065470.6	Barley	mitochondrion	23.08	7.6

Protein Annotations

EnsemblPlants:HORVU3Hr1G008310.1	EnsemblPlantsGene:HORVU3Hr1G008310	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF27	PFAM:PF00564	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	UniParc:UPI000B47D253	UniProt:A0A287K264	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:-:18927556..18927987

Molecular Weight (calculated)

14987.0 Da

IEP (calculated)

4.187

GRAVY (calculated)

-0.316

Length

143 amino acids

Sequence
(BLAST)

001: XXASLADVHG RLSRSLLAGQ PFTLKYQLPN EDLDSLISVS TDEDLDNLVD EYDRVAASSS SSGASSRTSR IRLFLFPAKP ESSSSLGSLL DDSSKSENWF
101: VDALNSAISG SFDGIPRGIS TDSASVNCLL GLEDDNASQH SRS

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.