CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008633.1-P	Field mustard	plastid	98.76	98.76
AT5G16220.1	Thale cress	plastid	70.52	71.85
CDX78676	Canola	plastid	64.74	69.93
CDX70680	Canola	plastid	65.36	68.76
Zm00001d003965_P001	Maize	mitochondrion	8.45	37.27
HORVU3Hr1G008310.1	Barley	cytosol	9.48	32.17
CDY36115	Canola	cytosol, nucleus, vacuole	15.46	28.96
VIT_14s0006g02490.t01	Wine grape	nucleus	30.1	28.13
CDY13638	Canola	mitochondrion	10.31	27.62
CDY24410	Canola	cytosol	14.64	27.52
CDY28543	Canola	plastid	9.9	27.27
CDX83621	Canola	mitochondrion	10.1	27.07
CDY48987	Canola	plastid	9.9	26.82
CDY48161	Canola	plastid	9.48	25.14
CDY39571	Canola	plastid	9.48	25.14
CDY72321	Canola	plastid	9.07	24.58
CDX84387	Canola	nucleus	9.9	24.49
CDY41501	Canola	cytosol	9.48	24.34
CDY66304	Canola	cytosol	8.25	24.1
CDY61217	Canola	cytosol, mitochondrion	8.25	24.1
Solyc02g086360.2.1	Tomato	cytosol	27.63	24.06
PGSC0003DMT400067817	Potato	cytosol	27.22	23.7
GSMUA_AchrUn_...	Banana	nucleus	18.76	23.58
CDY48129	Canola	cytosol, nucleus, plastid	9.28	23.56
CDY31319	Canola	nucleus	13.4	23.3
GSMUA_Achr10P...	Banana	nucleus	15.88	22.78
CDY46377	Canola	nucleus	18.35	22.47
CDY62874	Canola	nucleus	18.35	22.42
GSMUA_Achr2P07240_001	Banana	nucleus	24.33	21.45
CDX91230	Canola	nucleus	19.18	21.04
CDX97304	Canola	nucleus	19.18	20.95
CDY20093	Canola	extracellular, plasma membrane	8.25	20.62
GSMUA_Achr8P18320_001	Banana	nucleus	21.86	20.46
CDY21444	Canola	mitochondrion	10.93	20.08
CDX83177	Canola	mitochondrion	10.93	19.92
CDX91540	Canola	nucleus	11.55	19.86
CDY16375	Canola	nucleus	11.55	19.86
CDY40994	Canola	cytosol	23.09	19.65
CDY24442	Canola	cytosol	23.09	19.61
CDY46804	Canola	nucleus	18.97	19.33
EES00348	Sorghum	nucleus	26.39	19.31
Zm00001d039916_P010	Maize	nucleus	25.98	19.12
CDX92217	Canola	cytosol	23.09	19.11
CDY25942	Canola	nucleus, plastid	24.74	19.11
Zm00001d008591_P001	Maize	mitochondrion	26.19	19.1
CDY68695	Canola	nucleus	21.65	19.09
GSMUA_Achr1P21240_001	Banana	nucleus	23.51	19.0
CDY41073	Canola	nucleus, plastid	24.54	18.86
Os01t0139200-01	Rice	nucleus	25.57	18.48
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	26.6	18.43
CDY17690	Canola	nucleus, plastid	27.42	18.37
CDY66514	Canola	nucleus	23.92	18.01
CDY58263	Canola	nucleus	17.53	17.75
CDX69896	Canola	nucleus	17.11	17.66
CDX84525	Canola	nucleus	17.53	17.53
CDY21590	Canola	nucleus	17.11	17.47
TraesCS3A01G051800.1	Wheat	nucleus	24.95	17.19
TraesCS3B01G060500.1	Wheat	cytosol	23.3	17.07
TraesCS3D01G050900.1	Wheat	nucleus	23.3	17.04
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	24.33	16.79
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	25.15	14.42

Protein Annotations

EnsemblPlants:CDX69461	EnsemblPlantsGene:GSBRNA2T00135441001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF14	PFAM:PF00564	ProteinID:CDX69461	ProteinID:CDX69461.1
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0004EEB881	MapMan:35.2	:

Description

BnaA10g18100D

Coordinates

chrLK031790:+:346516..348832

Molecular Weight (calculated)

52184.0 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.442

Length

485 amino acids

Sequence
(BLAST)

001: MTTVSSASAA VTECAKAVTP RCTNSGKLRV MCRYGGSIVS LPQTKSPRYV GGDTRIVAVP PSAETSVASL VSHLAVTLGI SYDFKVKYQL PDQELDSLIS
101: VETDEDVQIM MEEHGYLTCE SSIPKTRVRL FLFPSKTQGG ASEGDPAQCK AGEEAAGDVD WLGIGEANPT RDELTTQPVL QHPKTDTWFV DALKGVEMMQ
201: TGGNNSGSSA GSGGGICGQE SMMLETNSSF GSTSSSVSSS KLPPMKSTGE DDTSNSQVKF APIESLTSGN TAATPISSHE LPTSPHVLET KLSPNLYEPD
301: LNKPVAVSGY PQFLNQAQQQ QQQPIYVVYT GQPPYMTGNS PMPLPAYQHM NPIHYQLQPQ PYPVYYPVEQ YNSRYVQAPP VRHNTALNTH HVESPVARTS
401: SPLAPEFSSQ VYLPPKPVDS SSVQTSSEAG VSTTCKDDFV YNTDLDDDTA RAQLYKSQPP APIVSSELQT MMLTEALGQL NTHKG

Best Arabidopsis Sequence Match ( AT5G16220.1 )
(BLAST)

001: MTTVSSAFAT VAEGAKVVTP RWKKNERNGK LRVMCRYGGS IVSPPQTKSP RYVGGDTRIV AIPSSAETSF ASLVSHLTVT LKISYPFKVK YQLPDQELDS
101: LISVEADEDV QIMMEEHGYL SSESSIPQSR IRLFLFPLKS QQSNEAGASQ GDSDQCKVET DIDWLGIEES NKPIREELTQ PVLQHPKTEM WFVDALKSVE
201: MMQTRRTNSG TSGSGDGNGG ICGQESMMLE TNSSFGSTSS SVSSSNLPPI KSSGEDNIAN SQVKFAPIES VTSNDNSAVT PIPSHELPSH SHAFENKPSS
301: NLYVAELNRP VPVPISGYPP FMNQAQQQHI QVIYTGQPYI TGNSPMTLPA TAYHHTNHVY YQRPPQPYPI YYIPVEQYSS RHVQALPVKP STVLNYHQVD
401: SPVVRTSSPL APEFSSQVYP LSKPVDSSVQ TSSEATLNTT SRDAFIYNTD VDDDNDIAHA QIYKSQPPAP TLPSQY

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9LF06]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.