Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016016_P001 | |
| Zm00001d018530_P001 | |
| Zm00001d043386_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01190.1 | Zm00001d016016_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d043386_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d018530_P001 | AT5G08330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G008310.1 | Barley | cytosol | 52.73 | 40.56 |
| GSMUA_Achr10P... | Banana | nucleus | 64.55 | 21.01 |
| Zm00001d033571_P001 | Maize | cytosol | 30.0 | 20.37 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 44.55 | 18.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.45 | 18.65 |
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 43.64 | 18.46 |
| CDY24410 | Canola | cytosol | 42.73 | 18.22 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.55 | 18.01 |
| Zm00001d049157_P001 | Maize | plastid | 37.27 | 17.98 |
| Zm00001d033564_P001 | Maize | cytosol, plastid | 33.64 | 15.42 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 70.91 | 15.06 |
| Zm00001d008591_P001 | Maize | mitochondrion | 90.91 | 15.04 |
| EES00348 | Sorghum | nucleus | 89.09 | 14.78 |
| Zm00001d039916_P010 | Maize | nucleus | 88.18 | 14.72 |
| Zm00001d006574_P001 | Maize | plastid | 49.09 | 14.4 |
| Os01t0139200-01 | Rice | nucleus | 87.27 | 14.31 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 69.09 | 13.82 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 82.73 | 13.75 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 82.73 | 13.73 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 83.64 | 13.07 |
| Zm00001d021746_P001 | Maize | plastid | 45.45 | 13.05 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 66.36 | 12.17 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 70.91 | 11.14 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 69.09 | 10.81 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 81.82 | 10.64 |
| Zm00001d010214_P003 | Maize | cytosol | 37.27 | 10.46 |
| Bra006344.1-P | Field mustard | plastid | 33.64 | 10.42 |
| VIT_14s0006g02490.t01 | Wine grape | nucleus | 48.18 | 10.21 |
| CDY68695 | Canola | nucleus | 50.91 | 10.18 |
| KRH39133 | Soybean | cytosol | 61.82 | 10.16 |
| KRH48572 | Soybean | cytosol | 59.09 | 10.14 |
| Solyc02g086360.2.1 | Tomato | cytosol | 50.91 | 10.05 |
| Bra022297.1-P | Field mustard | nucleus | 51.82 | 9.95 |
| PGSC0003DMT400067817 | Potato | cytosol | 50.0 | 9.87 |
| CDY40994 | Canola | cytosol | 50.91 | 9.82 |
| CDY24442 | Canola | cytosol | 50.91 | 9.81 |
| Solyc05g008830.2.1 | Tomato | nucleus | 57.27 | 9.8 |
| CDX92217 | Canola | cytosol | 51.82 | 9.73 |
| VIT_17s0000g03180.t01 | Wine grape | nucleus | 56.36 | 9.72 |
| CDY25942 | Canola | nucleus, plastid | 55.45 | 9.71 |
| Bra022296.1-P | Field mustard | cytosol | 51.82 | 9.63 |
| Solyc03g118870.2.1 | Tomato | nucleus | 55.45 | 9.58 |
| PGSC0003DMT400015310 | Potato | nucleus | 57.27 | 9.56 |
| Bra017462.1-P | Field mustard | cytosol, plastid | 55.45 | 9.5 |
| VIT_01s0011g04140.t01 | Wine grape | nucleus | 59.09 | 9.33 |
| KRH38173 | Soybean | nucleus | 54.55 | 9.2 |
| KRH35888 | Soybean | nucleus | 59.09 | 9.19 |
| CDY41073 | Canola | nucleus, plastid | 52.73 | 9.19 |
| Solyc04g007460.2.1 | Tomato | plastid | 56.36 | 9.09 |
| KRG90906 | Soybean | nucleus, plastid | 59.09 | 9.02 |
| AT3G18230.1 | Thale cress | nucleus, plastid | 54.55 | 9.01 |
| PGSC0003DMT400014442 | Potato | nucleus | 55.45 | 8.91 |
| Bra037596.1-P | Field mustard | nucleus | 51.82 | 8.86 |
| CDY66514 | Canola | nucleus | 51.82 | 8.85 |
| AT2G01190.1 | Thale cress | nucleus, plastid | 57.27 | 8.75 |
| CDY17690 | Canola | nucleus, plastid | 57.27 | 8.7 |
| Bra024899.1-P | Field mustard | nucleus, plastid | 57.27 | 8.68 |
| AT5G16220.1 | Thale cress | plastid | 37.27 | 8.61 |
| Zm00001d018447_P001 | Maize | extracellular | 42.73 | 8.58 |
| CDX78676 | Canola | plastid | 34.55 | 8.46 |
| CDX69461 | Canola | plastid | 37.27 | 8.45 |
| Bra008633.1-P | Field mustard | plastid | 37.27 | 8.45 |
| Zm00001d051939_P001 | Maize | cytosol | 40.91 | 8.36 |
| CDX70680 | Canola | plastid | 34.55 | 8.24 |
Protein Annotations
| EnsemblPlants:Zm00001d003965_P001 | EnsemblPlants:Zm00001d003965_T001 | EnsemblPlantsGene:Zm00001d003965 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 | PFAM:PF00564 |
| ProteinID:ONM18091.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI000842EC70 | UniProt:A0A1D6ECR4 |
| MapMan:35.2 | : | : | : | : | : |
Description
Octicosapeptide/Phox/Bem1p family protein
Coordinates
chr2:-:72593123..72593455
Molecular Weight (calculated)
11993.0 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.422
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MCNFGGRITP RPTDKSLCYL GGETRIVAVD RHASLADVHA RLSRSLLGGH PFMLKYQLPN EDLDSLISVS TDEDLDNLVD EYDRIAVTSS GSGSSRTSRI
101: HSSGWTPGSR
101: HSSGWTPGSR
001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.