Factsheet for Zm00001d051939_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001952_P001
Zm00001d026536_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64430.1	Zm00001d001952_P001	AT3G51180.1	21798944
AT5G64430.1	Zm00001d026536_P002	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07730	Sorghum	cytosol	86.06	81.8
Zm00001d018447_P001	Maize	extracellular	80.11	78.65
TraesCS6A01G380500.1	Wheat	cytosol	63.57	64.29
TraesCS6D01G365200.1	Wheat	cytosol	58.18	64.01
TraesCS6B01G419500.1	Wheat	cytosol	58.18	63.49
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	63.57	62.07
KRH57272	Soybean	cytosol	9.11	53.26
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	25.09	45.45
VIT_14s0068g01740.t01	Wine grape	cytosol	5.58	41.1
Zm00001d003965_P001	Maize	mitochondrion	8.36	40.91
VIT_17s0000g07170.t01	Wine grape	cytosol	12.83	39.43
CDY31319	Canola	nucleus	20.26	39.07
VIT_02s0033g00640.t01	Wine grape	cytosol	12.45	38.29
PGSC0003DMT400016330	Potato	nucleus	31.6	37.04
VIT_03s0097g00600.t01	Wine grape	nucleus	31.78	36.62
VIT_18s0001g08010.t01	Wine grape	nucleus	33.09	36.25
Solyc04g076820.1.1	Tomato	plastid	31.6	35.87
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	27.14	35.27
PGSC0003DMT400078796	Potato	cytosol	17.29	34.44
Solyc02g091670.1.1	Tomato	cytosol	17.1	34.07
KRH21700	Soybean	nucleus	27.51	33.64
PGSC0003DMT400008036	Potato	nucleus	30.67	33.6
Solyc01g106320.2.1	Tomato	extracellular	30.67	33.47
KRH49860	Soybean	nucleus	29.18	33.19
KRH16903	Soybean	nucleus	21.75	33.05
KRH42038	Soybean	cytosol	28.81	32.56
KRH10652	Soybean	cytosol	26.77	32.29
CDY46804	Canola	nucleus	28.25	31.93
Bra031918.1-P	Field mustard	nucleus	27.88	31.65
Bra024295.1-P	Field mustard	nucleus	25.46	31.57
AT5G64430.1	Thale cress	nucleus	29.55	30.99
KRH72507	Soybean	cytosol, nucleus, peroxisome	20.63	30.92
GSMUA_Achr1P05710_001	Banana	cytosol	27.7	30.6
CDY58263	Canola	nucleus	27.14	30.48
CDY21590	Canola	nucleus	26.77	30.32
CDX84525	Canola	nucleus	27.14	30.1
CDX69896	Canola	nucleus	26.21	30.0
Bra009393.1-P	Field mustard	nucleus	26.21	29.75
Zm00001d033571_P001	Maize	cytosol	7.99	26.54
AT5G09620.1	Thale cress	nucleus	25.84	26.18
Zm00001d006574_P001	Maize	plastid	17.84	25.6
Zm00001d021746_P001	Maize	plastid	18.22	25.59
Zm00001d033564_P001	Maize	cytosol, plastid	10.41	23.33
Zm00001d049157_P001	Maize	plastid	9.67	22.81
Zm00001d010214_P003	Maize	cytosol	12.64	17.35
Zm00001d039916_P010	Maize	nucleus	19.52	15.93
Zm00001d008591_P001	Maize	mitochondrion	19.33	15.64

Protein Annotations

EntrezGene:100381453	Gene3D:3.10.20.90	MapMan:35.2	ProteinID:AQK55508.1	EMBL:BT061301	EMBL:BT069221
UniProt:C0HG45	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom
PFAM:PF00564	PANTHER:PTHR31066	PANTHER:PTHR31066:SF5	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000194861B
EnsemblPlantsGene:Zm00001d051939	EnsemblPlants:Zm00001d051939_P001	EnsemblPlants:Zm00001d051939_T001	SEG:seg	:	:

Description

Octicosapeptide/Phox/Bem1p family protein

Coordinates

chr4:-:174861065..174862681

Molecular Weight (calculated)

56478.1 Da

IEP (calculated)

6.014

GRAVY (calculated)

-0.427

Length

538 amino acids

Sequence
(BLAST)

001: MAESGESSPN SAAATDDTHH EMPEAGAAAA AVHAQPRPPP PPSKVRLMVS YGGRIQPRPN DNQLAYVNGE TKILSLERPL CFPDFAARLA ALVGNAADVR
101: VKYQLPGEDL DALVSVTNDE DLEHLVHEYD RLHVHRHATA SSAGSSRGGS APRLRVFLFP VQSPPPPPQP AGILEPKVEQ RQWFVDALNT VLLPSSKQDP
201: PPVPPQQQKQ EQESVFAQQS PPPQAKHEAV FVQQSPPQPQ TVVQMQMPPP QHVVLAAASP DYLFGLDNGF VHPPAVKVKD PAGDPPAVRE SVPVELPAKN
301: EDRHPIPNPA GDNVAVSPAE YQRQIPGLEK LQVADNAAHQ PPPPAPAPAP APSLAPTPVP AALPRNGSDD SLTRGYPLAT PTPNSSAEYY LPKFPEKPPV
401: PPPPQSSAPP PPTYLQVQGR YTSVAPGSGA DRGPVFFIPA PHGYFAATAS PGATSYPAVY AVAPPSTAAN GSAASPAASN ATAYSPAPTQ VAYDSNGRAI
501: YYTSMLPQYP SAVNGMSSAG AVLGTEPVNP VAVKPTVS

Best Arabidopsis Sequence Match ( AT5G64430.1 )
(BLAST)

001: MEKFSYNSYP DSTDSSPRSR EIEFDNPPPP WDDQNQNQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGE TKILSVDRGI RFPVLASKLS TVCGGGDGGG
101: GEVTFKYQLP GEDLDALISV TNDDDLEHMM HEYDRLLRLS SKPARMRLFL FPASSGFGSQ SSTQSDRDRF VEALNTVPRL SESEKSVTAP PNNADFLFGS
201: EKVAAPPPPP PAEVKLPVPV ALEPPLFNDP RVIQPDHVVN PMEIQRQMQE FQRMHIRDQE QQQQQEAVYR RKSNEDGLIE TGGGYFSPPY IQNPAPPPPQ
301: QTIPQTNPQA PPMTTFWQGN HNPGVVFPTT THGLGLPEQP VYMIPSPSPS PVYHAPPPPQ PQGVIRPILT GQVNQGGYYP QVQRVASDTY REPHQSPYNV
401: AQPLQAPIGT KAAQQQQPPP PQPFTSGPPP PQYTAVPPPR QVVGLPDTSA YTQVTYTGGM GKQVYYTEAP PPQYHGVGLP VTGMSELRTG PDGKLVAMNM
501: APKVSSQSSD SAV

Arabidopsis Description

At5g64430 [Source:UniProtKB/TrEMBL;Acc:Q9FGF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.