Factsheet for PGSC0003DMT400078796

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091670.1.1	Tomato	cytosol	97.04	97.04
VIT_14s0068g01740.t01	Wine grape	cytosol	8.15	30.14
PGSC0003DMT400069641	Potato	mitochondrion	18.15	28.32
VIT_17s0000g07170.t01	Wine grape	cytosol	16.67	25.71
PGSC0003DMT400016330	Potato	nucleus	42.22	24.84
PGSC0003DMT400046652	Potato	plastid	18.15	24.75
VIT_02s0033g00640.t01	Wine grape	cytosol	15.93	24.57
PGSC0003DMT400008036	Potato	nucleus	42.59	23.42
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	18.89	21.7
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	30.74	20.05
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	21.48	19.53
GSMUA_Achr1P05710_001	Banana	cytosol	33.33	18.48
TraesCS6B01G419500.1	Wheat	cytosol	32.59	17.85
TraesCS6D01G365200.1	Wheat	cytosol	32.22	17.79
Zm00001d051939_P001	Maize	cytosol	34.44	17.29
TraesCS6A01G380500.1	Wheat	cytosol	33.7	17.11
Zm00001d018447_P001	Maize	extracellular	34.44	16.97
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	33.7	16.52
PGSC0003DMT400057688	Potato	nucleus	25.19	16.35
EES07730	Sorghum	cytosol	33.7	16.08
PGSC0003DMT400097584	Potato	nucleus	21.85	16.03
PGSC0003DMT400067817	Potato	cytosol	23.33	11.31
PGSC0003DMT400015310	Potato	nucleus	26.67	10.93
PGSC0003DMT400014442	Potato	nucleus	23.7	9.34

Protein Annotations

EnsemblPlants:PGSC0003DMT400078796	EnsemblPlantsGene:PGSC0003DMG400030661	EntrezGene:107062686	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF2	PFAM:PF00564
PGSC:PGSC0003DMG400030661	RefSeq:XP_015169071.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002948183
UniProt:M1D0R1	MapMan:35.2	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030661]

Coordinates

chr2:-:42020408..42021648

Molecular Weight (calculated)

29770.6 Da

IEP (calculated)

5.320

GRAVY (calculated)

-0.253

Length

270 amino acids

Sequence
(BLAST)

001: MENQKVKLMC SYGGKIQLRP HDHQLSYVGG DTKILTVDRN VKFSDVAAKV NCLCNCNAEV FIKYQLPGED LDALVSLIDD DDVEQMMVEY DRMQKVSTKP
101: ARLRLFLFYP IRLPESPLNP DFLFGFDKDY NPNPSSTATE DLLQLQFPEN SGLDMSKNEG SGVIAVPKIV CGDNSSSSLL VKNHYTQGLR ERHVNGGAYG
201: NAVQMVYGVP LMTGGYHTGF GQLGVVAAGG GQYMDQPVYN FVPAVTSVMV PDQHKMIVST TDTLSREIKG

Best Arabidopsis Sequence Match ( AT5G09620.1 )
(BLAST)

001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAIHQNQLH HQQEVIHQNQ LLQQEAIHQN
301: QMLQQQQQQE AMYRRKTEDE AGRYFPPTYT QNPAPVTNQQ PPVGYWQGNT NNSNIQGNIY TTTSQNLPEQ QQQQQQVYMI PAQSQAPGTL YQSVMRPTVQ
401: GNQGYYPSPV QRLHHPDAYM EQQNQPGYNV VQPQPTFSGG PQVMTSVGPQ VMTSVGPPMG LQEPYSQMGK PVYYTVAGEG MMVQPPPAQP QQQQQQYQGM
501: GQPVSGMTDL RTGPDGKVAV NMAAPQVSDS V

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.