Factsheet for Solyc02g091670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078796	Potato	cytosol	97.04	97.04
VIT_14s0068g01740.t01	Wine grape	cytosol	8.52	31.51
VIT_17s0000g07170.t01	Wine grape	cytosol	17.41	26.86
VIT_02s0033g00640.t01	Wine grape	cytosol	16.67	25.71
Solyc06g071750.2.1	Tomato	plastid	18.15	25.39
Solyc04g076820.1.1	Tomato	plastid	42.96	24.47
Solyc05g013530.2.1	Tomato	plastid	18.89	23.29
Solyc01g106320.2.1	Tomato	extracellular	41.85	22.92
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	31.48	20.53
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	21.48	19.53
GSMUA_Achr1P05710_001	Banana	cytosol	33.7	18.69
TraesCS6B01G419500.1	Wheat	cytosol	32.59	17.85
TraesCS6D01G365200.1	Wheat	cytosol	32.22	17.79
Solyc02g079360.1.1	Tomato	nucleus	24.81	17.4
TraesCS6A01G380500.1	Wheat	cytosol	33.7	17.11
Zm00001d051939_P001	Maize	cytosol	34.07	17.1
Zm00001d018447_P001	Maize	extracellular	34.44	16.97
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	33.7	16.52
EES07730	Sorghum	cytosol	33.7	16.08
Solyc05g008830.2.1	Tomato	nucleus	28.52	11.98
Solyc02g086360.2.1	Tomato	cytosol	22.96	11.13
Solyc04g007460.2.1	Tomato	plastid	26.3	10.41
Solyc03g118870.2.1	Tomato	nucleus	24.07	10.2

Protein Annotations

EnsemblPlants:Solyc02g091670.1.1	EnsemblPlantsGene:Solyc02g091670.1	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF2	PFAM:PF00564	SEG:seg
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002767B63	UniProt:K4BCW5	MapMan:35.2	:

Description

No Description!

Coordinates

chr2:-:52909098..52909910

Molecular Weight (calculated)

29816.7 Da

IEP (calculated)

5.320

GRAVY (calculated)

-0.287

Length

270 amino acids

Sequence
(BLAST)

001: MENQKVKLMC SYGGKIQLRP HDHQLSYVGG DTKILTVDRN VKFSDVASKV NCLCNCNAEV CMKYQLPGED LDALVSLIDD DDVEQMMVEY DRMQKVSNKP
101: ARLRLFLFYP IRLPESPLNP DFLFGFDKDY NPNPSPTATE DLLQLQFPEN SGLDMSKNEG SGVIAVPKIV CGDSSSSSLL VKNHYTQGLR ERHVNGGTYG
201: NAVQMVYGVP LMTGGYHTGF GQLGVVAAGG GQYMDQPVYN FVPAVTSVMV PDQHKMIVST TDTLSREIKS

Best Arabidopsis Sequence Match ( AT5G09620.1 )
(BLAST)

001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAIHQNQLH HQQEVIHQNQ LLQQEAIHQN
301: QMLQQQQQQE AMYRRKTEDE AGRYFPPTYT QNPAPVTNQQ PPVGYWQGNT NNSNIQGNIY TTTSQNLPEQ QQQQQQVYMI PAQSQAPGTL YQSVMRPTVQ
401: GNQGYYPSPV QRLHHPDAYM EQQNQPGYNV VQPQPTFSGG PQVMTSVGPQ VMTSVGPPMG LQEPYSQMGK PVYYTVAGEG MMVQPPPAQP QQQQQQYQGM
501: GQPVSGMTDL RTGPDGKVAV NMAAPQVSDS V

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.