Factsheet for Zm00001d018447_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001952_P001
Zm00001d026536_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64430.1	Zm00001d001952_P001	AT3G51180.1	21798944
AT5G64430.1	Zm00001d026536_P002	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07730	Sorghum	cytosol	85.95	83.22
Zm00001d051939_P001	Maize	cytosol	78.65	80.11
TraesCS6D01G365200.1	Wheat	cytosol	56.2	62.99
TraesCS6B01G419500.1	Wheat	cytosol	56.2	62.47
TraesCS6A01G380500.1	Wheat	cytosol	60.4	62.22
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	60.4	60.07
KRH57272	Soybean	cytosol	8.94	53.26
VIT_14s0068g01740.t01	Wine grape	cytosol	5.84	43.84
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	23.54	43.43
Zm00001d003965_P001	Maize	mitochondrion	8.58	42.73
VIT_17s0000g07170.t01	Wine grape	cytosol	12.04	37.71
VIT_03s0097g00600.t01	Wine grape	nucleus	31.93	37.47
CDY31319	Canola	nucleus	18.98	37.28
PGSC0003DMT400016330	Potato	nucleus	31.02	37.04
VIT_18s0001g08010.t01	Wine grape	nucleus	32.85	36.66
VIT_02s0033g00640.t01	Wine grape	cytosol	11.68	36.57
Solyc04g076820.1.1	Tomato	plastid	31.2	36.08
Solyc02g091670.1.1	Tomato	cytosol	16.97	34.44
PGSC0003DMT400078796	Potato	cytosol	16.97	34.44
PGSC0003DMT400008036	Potato	nucleus	30.11	33.6
KRH21700	Soybean	nucleus	26.82	33.41
KRH49860	Soybean	nucleus	28.65	33.19
Solyc01g106320.2.1	Tomato	extracellular	29.74	33.06
KRH42038	Soybean	cytosol	28.47	32.77
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	24.45	32.37
KRH10652	Soybean	cytosol	26.09	32.06
AT5G64430.1	Thale cress	nucleus	29.74	31.77
KRH16903	Soybean	nucleus	20.44	31.64
Bra024295.1-P	Field mustard	nucleus	25.0	31.57
CDY46804	Canola	nucleus	26.82	30.88
Bra031918.1-P	Field mustard	nucleus	26.46	30.59
GSMUA_Achr1P05710_001	Banana	cytosol	26.64	29.98
CDY58263	Canola	nucleus	26.09	29.85
KRH72507	Soybean	cytosol, nucleus, peroxisome	19.53	29.8
CDY21590	Canola	nucleus	25.73	29.68
CDX84525	Canola	nucleus	26.09	29.48
CDX69896	Canola	nucleus	25.18	29.36
Bra009393.1-P	Field mustard	nucleus	25.18	29.11
AT5G09620.1	Thale cress	nucleus	26.46	27.31
Zm00001d033571_P001	Maize	cytosol	7.85	26.54
Zm00001d006574_P001	Maize	plastid	16.42	24.0
Zm00001d021746_P001	Maize	plastid	16.42	23.5
Zm00001d033564_P001	Maize	cytosol, plastid	10.22	23.33
Zm00001d049157_P001	Maize	plastid	9.67	23.25
Zm00001d010214_P003	Maize	cytosol	11.68	16.33
Zm00001d039916_P010	Maize	nucleus	19.34	16.09
Zm00001d008591_P001	Maize	mitochondrion	19.16	15.79

Protein Annotations

EnsemblPlants:Zm00001d018447_P001	EnsemblPlants:Zm00001d018447_T001	EnsemblPlantsGene:Zm00001d018447	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF5	PFAM:PF00564
ProteinID:AQK76016.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000221D30E	UniProt:A0A1D6HP12
MapMan:35.2	:	:	:	:	:

Description

Octicosapeptide/Phox/Bem1p family protein

Coordinates

chr5:+:221089092..221090738

Molecular Weight (calculated)

57344.2 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.416

Length

548 amino acids

Sequence
(BLAST)

001: MAETGESSPN PAAAPEDTHH EGSEVPAAAV AAVHAQPQLQ PQPRPPPQPS KVRLMVSYGG RIQPRPHDNQ LAYVNGETKI LSLERPVLFA DFAARLTTLV
101: GNARDVCVKY QLPGEDLDAL ISVTNDEDLE HLVVEYDRAH NNGPAAGSGS GRGGATPRLR VFLFPVQPPP PPPPAGLLEP KADQRLYIVE ALNTVSLPSS
201: KLDPPPVPSH QSSPPQQQKR ESVFAQQSSS PPPPPPQAKH EAVFVQQAPP QPQTAFQMPP PPQPSHVVLT AAGPDYLFGL DNGFVPPPAV KVKDPAGDPP
301: TVRENVPVEI PAKNDDRHPN PAGDHVAVSP VVSPAEYQRQ IQELEKLQVA DNATHQPPPP ATAPAPTHGP VPAALPRNGS DDSLARAYPP VTATPTSNAE
401: YYIPKFPEKP PVPPLSSAPP PTTYVQVQGR YASVAPGSGA DHAPVFFIPA PHGYFAAAAS PGATSYPAVY AVAPPSATAN GSAPSAVVSN ATAYAPAPTQ
501: VAYDSNGRAI YYTSMLPQYP SAVNGMSAPG GVLGTEPAKQ VAVKPTVS

Best Arabidopsis Sequence Match ( AT5G64430.1 )
(BLAST)

001: MEKFSYNSYP DSTDSSPRSR EIEFDNPPPP WDDQNQNQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGE TKILSVDRGI RFPVLASKLS TVCGGGDGGG
101: GEVTFKYQLP GEDLDALISV TNDDDLEHMM HEYDRLLRLS SKPARMRLFL FPASSGFGSQ SSTQSDRDRF VEALNTVPRL SESEKSVTAP PNNADFLFGS
201: EKVAAPPPPP PAEVKLPVPV ALEPPLFNDP RVIQPDHVVN PMEIQRQMQE FQRMHIRDQE QQQQQEAVYR RKSNEDGLIE TGGGYFSPPY IQNPAPPPPQ
301: QTIPQTNPQA PPMTTFWQGN HNPGVVFPTT THGLGLPEQP VYMIPSPSPS PVYHAPPPPQ PQGVIRPILT GQVNQGGYYP QVQRVASDTY REPHQSPYNV
401: AQPLQAPIGT KAAQQQQPPP PQPFTSGPPP PQYTAVPPPR QVVGLPDTSA YTQVTYTGGM GKQVYYTEAP PPQYHGVGLP VTGMSELRTG PDGKLVAMNM
501: APKVSSQSSD SAV

Arabidopsis Description

At5g64430 [Source:UniProtKB/TrEMBL;Acc:Q9FGF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.