Factsheet for Bra009393.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69896	Canola	nucleus	98.31	99.15
AT5G09620.1	Thale cress	nucleus	77.22	68.93
KRH57272	Soybean	cytosol	13.29	68.48
Bra031918.1-P	Field mustard	nucleus	59.49	59.49
Bra024295.1-P	Field mustard	nucleus	53.59	58.53
KRH10652	Soybean	cytosol	41.35	43.95
VIT_03s0097g00600.t01	Wine grape	nucleus	42.62	43.25
KRH21700	Soybean	nucleus	39.45	42.5
KRH49860	Soybean	nucleus	41.56	41.65
KRH42038	Soybean	cytosol	41.77	41.6
PGSC0003DMT400008036	Potato	nucleus	42.62	41.14
Solyc01g106320.2.1	Tomato	extracellular	42.19	40.57
Bra032936.1-P	Field mustard	plastid	12.66	33.52
Bra016197.1-P	Field mustard	mitochondrion	11.18	31.93
Bra025209.1-P	Field mustard	mitochondrion	12.03	31.49
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	24.05	27.54
Bra018071.1-P	Field mustard	plastid	10.55	27.32
Bra038608.1-P	Field mustard	nucleus	11.18	27.32
Zm00001d051939_P001	Maize	cytosol	29.75	26.21
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.35	26.15
Bra035855.1-P	Field mustard	cytosol	10.34	25.65
TraesCS6A01G380500.1	Wheat	cytosol	28.48	25.38
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	15.82	25.25
Zm00001d018447_P001	Maize	extracellular	29.11	25.18
TraesCS6B01G419500.1	Wheat	cytosol	25.74	24.75
TraesCS6D01G365200.1	Wheat	cytosol	25.53	24.74
EES07730	Sorghum	cytosol	29.54	24.73
Bra022508.1-P	Field mustard	nucleus	14.56	24.47
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	28.27	24.32
Bra000599.1-P	Field mustard	mitochondrion	13.5	24.15
GSMUA_Achr1P05710_001	Banana	cytosol	24.68	24.02
Bra029559.1-P	Field mustard	nucleus	17.3	20.76
Bra018513.1-P	Field mustard	nucleus	17.72	18.92
Bra006344.1-P	Field mustard	plastid	13.29	17.75
Bra008633.1-P	Field mustard	plastid	17.3	16.91
Bra017462.1-P	Field mustard	cytosol, plastid	21.73	16.04
Bra024899.1-P	Field mustard	nucleus, plastid	23.0	15.01
Bra022297.1-P	Field mustard	nucleus	16.88	13.96
Bra022296.1-P	Field mustard	cytosol	17.3	13.85
Bra037596.1-P	Field mustard	nucleus	17.51	12.91

Protein Annotations

EnsemblPlants:Bra009393.1	EnsemblPlants:Bra009393.1-P	EnsemblPlantsGene:Bra009393	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	ncoils:Coil	PANTHER:PTHR31066	PANTHER:PTHR31066:SF2
PFAM:PF00564	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002547676	UniProt:M4CYU6
MapMan:35.2	:	:	:	:	:

Description

AT5G64430 (E=2e-094) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA10:-:16450911..16452335

Molecular Weight (calculated)

52853.6 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.867

Length

474 amino acids

Sequence
(BLAST)

001: MEKFSYNSYP DSAESSPRSR DVDFDNPPPW EDQTQQQQQQ THSYKVKFMC SYGGKIQPRP HDNQLTYVNG DTKILSVDRG IRFPALASKL SAVIGGDGGG
101: GEISFKYQLP GEDLDALISV TNEDDLEHMM HEYDRLLRMS SKPARMRLFL FPLSSPVSTG GGFGSEGSTK SDRETLNNTI TNRPELEKSV TAPASNADFL
201: FGSEKVVVAP PAPASPPQQI IQDPQMFVNQ QVITPEQHPV DIQRQIHEFQ RIQIRDQEQQ MQQQLQQEAM YRRKSEDGRY FTPTYAQNQP PTTTVSQTNQ
301: QPPVGYWQGN NNVPGNNIYT TTSQNLPEQQ VYMIPAQSQA PGTLYHSVMR PPTQGNQGYF PPVQQRVQQH HPDPYMEQQN NQQGYNVVQP PQPTYSGGPQ
401: VMSSGPMGLH ETQPYSQMGN PVYYTVAGDG MMVPPQPHQP QYQGMGQPVS GMTGPDGKVV VNTAPKVSQS SDSV

Best Arabidopsis Sequence Match ( AT5G09620.2 )
(BLAST)

001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAMYRRKTE DEAGRYFPPT YTQNPAPVTN
301: QQPPVGYWQG NTNNSNIQGN IYTTTSQNLP EQQQQQQQVY MIPAQSQAPG TLYQSVMRPT VQGNQGYYPS PVQRLHHPDA YMEQQNQPGY NVVQPQPTFS
401: GGPQVMTSVG PQVMTSVGPP MGLQEPYSQM GKPVYYTVAG EGMMVQPPPA QPQQQQQQYQ GMGQPVSGMT DLRTGPDGKV AVNMAAPQVS DSV

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.