Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G64430.1 | KRH28782 | AT3G51180.1 | 21798944 |
| AT5G64430.1 | KRH28783 | AT3G51180.1 | 21798944 |
| AT5G64430.1 | KRH69800 | AT3G51180.1 | 21798944 |
| AT5G64430.1 | KRH69802 | AT3G51180.1 | 21798944 |
| AT5G64430.1 | KRH76672 | AT3G51180.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29762 | Soybean | plastid | 32.61 | 25.21 |
| CDY31319 | Canola | nucleus | 66.3 | 21.86 |
| KRH63619 | Soybean | plastid | 39.13 | 18.56 |
| KRH45586 | Soybean | plastid | 35.87 | 18.13 |
| KRH54323 | Soybean | cytosol, nucleus, plastid | 35.87 | 17.74 |
| KRH69636 | Soybean | plastid | 40.22 | 17.45 |
| KRH16903 | Soybean | nucleus | 64.13 | 16.67 |
| KRH49860 | Soybean | nucleus | 84.78 | 16.49 |
| KRH74522 | Soybean | nucleus | 41.3 | 16.45 |
| KRH42038 | Soybean | cytosol | 83.7 | 16.18 |
| KRH72507 | Soybean | cytosol, nucleus, peroxisome | 63.04 | 16.16 |
| HORVU3Hr1G075060.1 | Barley | cytosol, peroxisome | 47.83 | 14.81 |
| KRH03222 | Soybean | cytosol | 31.52 | 14.65 |
| KRH10652 | Soybean | cytosol | 68.48 | 14.13 |
| KRH21700 | Soybean | nucleus | 66.3 | 13.86 |
| Bra024295.1-P | Field mustard | nucleus | 64.13 | 13.59 |
| CDX69896 | Canola | nucleus | 68.48 | 13.4 |
| Bra009393.1-P | Field mustard | nucleus | 68.48 | 13.29 |
| CDY21590 | Canola | nucleus | 68.48 | 13.26 |
| KRH26304 | Soybean | nucleus | 36.96 | 13.03 |
| Bra031918.1-P | Field mustard | nucleus | 66.3 | 12.87 |
| CDY46804 | Canola | nucleus | 66.3 | 12.82 |
| VIT_03s0097g00600.t01 | Wine grape | nucleus | 64.13 | 12.63 |
| GSMUA_Achr1P20460_001 | Banana | cytosol, plastid | 56.52 | 12.56 |
| CDY58263 | Canola | nucleus | 65.22 | 12.53 |
| CDX84525 | Canola | nucleus | 65.22 | 12.37 |
| KRH06059 | Soybean | nucleus | 35.87 | 12.31 |
| AT5G64430.1 | Thale cress | nucleus | 66.3 | 11.89 |
| PGSC0003DMT400008036 | Potato | nucleus | 63.04 | 11.81 |
| Solyc01g106320.2.1 | Tomato | extracellular | 63.04 | 11.76 |
| AT5G09620.1 | Thale cress | nucleus | 67.39 | 11.68 |
| KRH41951 | Soybean | nucleus | 52.17 | 11.4 |
| KRH49930 | Soybean | nucleus | 51.09 | 11.08 |
| GSMUA_Achr1P05710_001 | Banana | cytosol | 56.52 | 10.68 |
| TraesCS6B01G419500.1 | Wheat | cytosol | 56.52 | 10.55 |
| TraesCS6D01G365200.1 | Wheat | cytosol | 53.26 | 10.02 |
| TraesCS6A01G380500.1 | Wheat | cytosol | 57.61 | 9.96 |
| HORVU6Hr1G089280.5 | Barley | cytosol, mitochondrion, nucleus | 56.52 | 9.44 |
| Zm00001d051939_P001 | Maize | cytosol | 53.26 | 9.11 |
| Zm00001d018447_P001 | Maize | extracellular | 53.26 | 8.94 |
| EES07730 | Sorghum | cytosol | 53.26 | 8.66 |
| KRH38173 | Soybean | nucleus | 44.57 | 6.29 |
| KRH48572 | Soybean | cytosol | 43.48 | 6.24 |
| KRH39133 | Soybean | cytosol | 44.57 | 6.13 |
| KRH35888 | Soybean | nucleus | 45.65 | 5.94 |
| KRG90906 | Soybean | nucleus, plastid | 45.65 | 5.83 |
Protein Annotations
| EMBL:ACUP02002823 | EnsemblPlants:KRH57272 | EnsemblPlantsGene:GLYMA_05G050800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF2 | PFAM:PF00564 | ProteinID:KRH57271.1 |
| ProteinID:KRH57272 | ProteinID:KRH57272.1 | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI00023C44B4 | UniProt:K7KMZ0 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:4545741..4548974
Molecular Weight (calculated)
10671.1 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.110
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MIPLKRNLSC KIQPRTHDNQ LSYVVGDTTI LAVDRSVMFP AFLSKLAGED LDALISVTND DDLEHMMLEY ERLYRPNLKP IRMRLFLFTL SN
001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAMYRRKTE DEAGRYFPPT YTQNPAPVTN
301: QQPPVGYWQG NTNNSNIQGN IYTTTSQNLP EQQQQQQQVY MIPAQSQAPG TLYQSVMRPT VQGNQGYYPS PVQRLHHPDA YMEQQNQPGY NVVQPQPTFS
401: GGPQVMTSVG PQVMTSVGPP MGLQEPYSQM GKPVYYTVAG EGMMVQPPPA QPQQQQQQYQ GMGQPVSGMT DLRTGPDGKV AVNMAAPQVS DSV
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAMYRRKTE DEAGRYFPPT YTQNPAPVTN
301: QQPPVGYWQG NTNNSNIQGN IYTTTSQNLP EQQQQQQQVY MIPAQSQAPG TLYQSVMRPT VQGNQGYYPS PVQRLHHPDA YMEQQNQPGY NVVQPQPTFS
401: GGPQVMTSVG PQVMTSVGPP MGLQEPYSQM GKPVYYTVAG EGMMVQPPPA QPQQQQQQYQ GMGQPVSGMT DLRTGPDGKV AVNMAAPQVS DSV
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.