Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54323 | Soybean | cytosol, nucleus, plastid | 60.1 | 63.98 |
| KRH63619 | Soybean | plastid | 62.63 | 63.92 |
| VIT_17s0000g09190.t01 | Wine grape | cytosol, nucleus, plastid | 39.39 | 49.06 |
| CDY41501 | Canola | cytosol | 43.43 | 45.5 |
| AT3G48240.1 | Thale cress | cytosol, nucleus, plastid | 40.4 | 44.44 |
| Bra038608.1-P | Field mustard | nucleus | 43.43 | 44.33 |
| CDY72321 | Canola | plastid | 39.39 | 43.58 |
| CDX84387 | Canola | nucleus | 42.93 | 43.37 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 41.41 | 42.93 |
| PGSC0003DMT400069641 | Potato | mitochondrion | 37.37 | 42.77 |
| Bra018071.1-P | Field mustard | plastid | 39.39 | 42.62 |
| CDY39571 | Canola | plastid | 39.39 | 42.62 |
| Bra035855.1-P | Field mustard | cytosol | 40.91 | 42.41 |
| AT5G63130.2 | Thale cress | nucleus | 40.91 | 42.19 |
| CDY48161 | Canola | plastid | 38.89 | 42.08 |
| KRH29762 | Soybean | plastid | 25.25 | 42.02 |
| PGSC0003DMT400046652 | Potato | plastid | 41.41 | 41.41 |
| KRH45586 | Soybean | plastid | 36.36 | 39.56 |
| Solyc06g071750.2.1 | Tomato | plastid | 37.88 | 38.86 |
| KRH69636 | Soybean | plastid | 40.4 | 37.74 |
| KRH74522 | Soybean | nucleus | 40.4 | 34.63 |
| KRH57272 | Soybean | cytosol | 14.65 | 31.52 |
| KRH06059 | Soybean | nucleus | 27.78 | 20.52 |
| KRH26304 | Soybean | nucleus | 26.77 | 20.31 |
| KRH21700 | Soybean | nucleus | 31.82 | 14.32 |
| KRH10652 | Soybean | cytosol | 30.81 | 13.68 |
| KRH16903 | Soybean | nucleus | 24.24 | 13.56 |
| KRH41951 | Soybean | nucleus | 28.79 | 13.54 |
| KRH72507 | Soybean | cytosol, nucleus, peroxisome | 24.24 | 13.37 |
| KRH49930 | Soybean | nucleus | 27.27 | 12.74 |
| KRH42038 | Soybean | cytosol | 29.8 | 12.39 |
| KRH49860 | Soybean | nucleus | 28.79 | 12.05 |
| KRH35888 | Soybean | nucleus | 33.33 | 9.34 |
| KRG90906 | Soybean | nucleus, plastid | 32.83 | 9.02 |
| KRH48572 | Soybean | cytosol | 28.79 | 8.89 |
| KRH39133 | Soybean | cytosol | 29.8 | 8.82 |
| KRH38173 | Soybean | nucleus | 28.79 | 8.74 |
Protein Annotations
| EMBL:ACUP02010339 | EnsemblPlants:KRH03222 | EnsemblPlantsGene:GLYMA_17G084900 | EntrezGene:100815502 | Gene3D:3.10.20.90 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF10 |
| PFAM:PF00564 | ProteinID:KRH03222 | ProteinID:KRH03222.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 |
| UniParc:UPI000233F08E | UniProt:I1MTC8 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:6551300..6552339
Molecular Weight (calculated)
21532.8 Da
IEP (calculated)
9.706
GRAVY (calculated)
-0.277
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKAIDNTI KILYSYGGKI LPRHTDAKLR YYGGHTRVLS LHPSTSFSEL ILKLTELCAS PVTLKCPLPN GDLDTLISVT SDEDLANIIH LYDRASSSLP
101: HRLKIRAILS PPKKLSPSPS SPSSSAAHSP SGGSPHSAAD SLPCPAAHQF VRRKCSPVPV AYPISVRSGA AKGCMYTRQL DGSPRFLYRG VHWNNYCH
101: HRLKIRAILS PPKKLSPSPS SPSSSAAHSP SGGSPHSAAD SLPCPAAHQF VRRKCSPVPV AYPISVRSGA AKGCMYTRQL DGSPRFLYRG VHWNNYCH
001: MVAVAENQKT KNSLKFLCSY GGRILPRSID GKLRYVGGFT RVLSVHHSIS FTELTMKLEE FCGYSVELKC QLPNGDLETL ISVKSDEDLV NIVEEYDRVY
101: GGKIRAILSP PKQMSPRSSG GGGDLSPKSP FSVVASPSPP RYCVAPPTEN LLSRFRMRTG EYSRCCNCRV PNRDSKLIWQ
101: GGKIRAILSP PKQMSPRSSG GGGDLSPKSP FSVVASPSPP RYCVAPPTEN LLSRFRMRTG EYSRCCNCRV PNRDSKLIWQ
Arabidopsis Description
At3g48240 [Source:UniProtKB/TrEMBL;Acc:Q9STK4]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.