Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72321 | Canola | plastid | 89.01 | 94.97 |
| CDY41501 | Canola | cytosol | 80.1 | 80.95 |
| AT5G63130.2 | Thale cress | nucleus | 80.63 | 80.21 |
| CDX84387 | Canola | nucleus | 81.15 | 79.08 |
| CDY39571 | Canola | plastid | 62.83 | 65.57 |
| CDY48161 | Canola | plastid | 62.83 | 65.57 |
| VIT_17s0000g09190.t01 | Wine grape | cytosol, nucleus, plastid | 41.36 | 49.69 |
| KRH63619 | Soybean | plastid | 47.12 | 46.39 |
| KRH54323 | Soybean | cytosol, nucleus, plastid | 45.03 | 46.24 |
| PGSC0003DMT400069641 | Potato | mitochondrion | 40.31 | 44.51 |
| CDX83621 | Canola | mitochondrion | 41.36 | 43.65 |
| CDY28543 | Canola | plastid | 39.27 | 42.61 |
| CDY48987 | Canola | plastid | 39.79 | 42.46 |
| CDY66304 | Canola | cytosol | 36.65 | 42.17 |
| CDY61217 | Canola | cytosol, mitochondrion | 36.65 | 42.17 |
| KRH03222 | Soybean | cytosol | 42.93 | 41.41 |
| CDY13638 | Canola | mitochondrion | 38.22 | 40.33 |
| PGSC0003DMT400046652 | Potato | plastid | 39.27 | 37.88 |
| Solyc06g071750.2.1 | Tomato | plastid | 38.22 | 37.82 |
| CDY20093 | Canola | extracellular, plasma membrane | 36.65 | 36.08 |
| CDY21444 | Canola | mitochondrion | 30.89 | 22.35 |
| CDX83177 | Canola | mitochondrion | 30.37 | 21.8 |
| CDY16375 | Canola | nucleus | 30.37 | 20.57 |
| CDX91540 | Canola | nucleus | 30.37 | 20.57 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 24.08 | 17.76 |
| CDY31319 | Canola | nucleus | 25.13 | 17.2 |
| CDY24410 | Canola | cytosol | 23.04 | 17.05 |
| CDY62874 | Canola | nucleus | 25.65 | 12.34 |
| CDY46377 | Canola | nucleus | 25.13 | 12.12 |
| CDX84525 | Canola | nucleus | 29.32 | 11.55 |
| CDY58263 | Canola | nucleus | 28.8 | 11.48 |
| CDX91230 | Canola | nucleus | 26.18 | 11.31 |
| CDX69896 | Canola | nucleus | 27.75 | 11.28 |
| CDX97304 | Canola | nucleus | 26.18 | 11.26 |
| CDY21590 | Canola | nucleus | 27.75 | 11.16 |
| CDY46804 | Canola | nucleus | 27.75 | 11.13 |
| CDX78676 | Canola | plastid | 23.04 | 9.8 |
| CDX70680 | Canola | plastid | 23.04 | 9.54 |
| CDY25942 | Canola | nucleus, plastid | 30.89 | 9.39 |
| CDX69461 | Canola | plastid | 23.56 | 9.28 |
| CDY40994 | Canola | cytosol | 27.23 | 9.12 |
| CDY24442 | Canola | cytosol | 27.23 | 9.11 |
| CDX92217 | Canola | cytosol | 27.75 | 9.04 |
| CDY41073 | Canola | nucleus, plastid | 29.84 | 9.03 |
| CDY68695 | Canola | nucleus | 25.13 | 8.73 |
| CDY17690 | Canola | nucleus, plastid | 31.94 | 8.43 |
| CDY66514 | Canola | nucleus | 25.13 | 7.45 |
Protein Annotations
| EnsemblPlants:CDY48129 | EnsemblPlantsGene:GSBRNA2T00088926001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF10 | PFAM:PF00564 | ProteinID:CDY48129 |
| ProteinID:CDY48129.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EE4EFF | UniProt:A0A078IFN9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng15710DBnaCnng15710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFN9]
Coordinates
chrLK032755:+:65321..66134
Molecular Weight (calculated)
21052.1 Da
IEP (calculated)
9.695
GRAVY (calculated)
-0.445
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAVDANEK KSGSSLKFLC SYGGKILPRS TDGKLRYVGG HTRVLSVDRS ISFEELTKKL FEFCGYSVDL RCQLPNGDLE TLISVKSDEE LANIVELYNR
101: VSGSKIKAVL SPPRSQKSPS SSSGGGGDRS PNSPFSVTLS PPNSPPLAYG RYLQSRYCLP PTDLARRFHQ RSGESYCYAC RVHKGSRLIW H
101: VSGSKIKAVL SPPRSQKSPS SSSGGGGDRS PNSPFSVTLS PPNSPPLAYG RYLQSRYCLP PTDLARRFHQ RSGESYCYAC RVHKGSRLIW H
001: MVAVDYTEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVDRSI SFSELMKKLY EFCGYSVDLR CQLPNGDLET LISVKSEEEL AEIVEEYDRI
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH
Arabidopsis Description
At5g63130 [Source:UniProtKB/TrEMBL;Acc:Q9FML0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.