Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69896 | Canola | nucleus | 93.89 | 94.89 |
| AT5G09620.1 | Thale cress | nucleus | 77.47 | 69.3 |
| KRH57272 | Soybean | cytosol | 13.26 | 68.48 |
| CDY31319 | Canola | nucleus | 38.53 | 65.59 |
| CDX84525 | Canola | nucleus | 61.68 | 60.41 |
| CDY58263 | Canola | nucleus | 60.63 | 60.13 |
| CDY46804 | Canola | nucleus | 59.58 | 59.45 |
| KRH10652 | Soybean | cytosol | 41.47 | 44.17 |
| VIT_03s0097g00600.t01 | Wine grape | nucleus | 42.74 | 43.47 |
| KRH21700 | Soybean | nucleus | 39.37 | 42.5 |
| KRH49860 | Soybean | nucleus | 41.68 | 41.86 |
| KRH42038 | Soybean | cytosol | 41.68 | 41.6 |
| PGSC0003DMT400008036 | Potato | nucleus | 42.32 | 40.94 |
| Solyc01g106320.2.1 | Tomato | extracellular | 41.89 | 40.37 |
| CDY28543 | Canola | plastid | 12.63 | 34.09 |
| CDX83621 | Canola | mitochondrion | 12.63 | 33.15 |
| CDY48987 | Canola | plastid | 12.42 | 32.96 |
| CDY66304 | Canola | cytosol | 11.37 | 32.53 |
| CDY13638 | Canola | mitochondrion | 12.21 | 32.04 |
| CDY61217 | Canola | cytosol, mitochondrion | 10.95 | 31.33 |
| CDY41501 | Canola | cytosol | 11.16 | 28.04 |
| GSMUA_Achr1P20460_001 | Banana | cytosol, plastid | 24.42 | 28.02 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 11.16 | 27.75 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 14.95 | 27.41 |
| CDY72321 | Canola | plastid | 10.32 | 27.37 |
| CDY39571 | Canola | plastid | 10.53 | 27.32 |
| CDY48161 | Canola | plastid | 10.53 | 27.32 |
| CDY20093 | Canola | extracellular, plasma membrane | 11.16 | 27.32 |
| CDY24410 | Canola | cytosol | 14.74 | 27.13 |
| CDX84387 | Canola | nucleus | 11.16 | 27.04 |
| Zm00001d051939_P001 | Maize | cytosol | 30.32 | 26.77 |
| TraesCS6A01G380500.1 | Wheat | cytosol | 29.05 | 25.94 |
| Zm00001d018447_P001 | Maize | extracellular | 29.68 | 25.73 |
| TraesCS6D01G365200.1 | Wheat | cytosol | 26.11 | 25.36 |
| TraesCS6B01G419500.1 | Wheat | cytosol | 26.32 | 25.36 |
| HORVU3Hr1G075060.1 | Barley | cytosol, peroxisome | 15.79 | 25.25 |
| EES07730 | Sorghum | cytosol | 29.89 | 25.09 |
| HORVU6Hr1G089280.5 | Barley | cytosol, mitochondrion, nucleus | 28.84 | 24.86 |
| CDY21444 | Canola | mitochondrion | 13.68 | 24.62 |
| CDX91540 | Canola | nucleus | 14.53 | 24.47 |
| CDY16375 | Canola | nucleus | 14.53 | 24.47 |
| CDX83177 | Canola | mitochondrion | 13.68 | 24.44 |
| GSMUA_Achr1P05710_001 | Banana | cytosol | 25.05 | 24.44 |
| CDY46377 | Canola | nucleus | 17.47 | 20.96 |
| CDY62874 | Canola | nucleus | 17.47 | 20.91 |
| CDX91230 | Canola | nucleus | 17.89 | 19.23 |
| CDX97304 | Canola | nucleus | 17.89 | 19.14 |
| CDX69461 | Canola | plastid | 17.47 | 17.11 |
| CDX78676 | Canola | plastid | 15.79 | 16.7 |
| CDX70680 | Canola | plastid | 15.79 | 16.27 |
| CDY41073 | Canola | nucleus, plastid | 21.47 | 16.16 |
| CDY25942 | Canola | nucleus, plastid | 21.05 | 15.92 |
| CDY17690 | Canola | nucleus, plastid | 22.53 | 14.78 |
| CDY40994 | Canola | cytosol | 17.05 | 14.21 |
| CDY24442 | Canola | cytosol | 17.05 | 14.19 |
| CDX92217 | Canola | cytosol | 17.05 | 13.82 |
| CDY66514 | Canola | nucleus | 17.26 | 12.73 |
| CDY68695 | Canola | nucleus | 14.53 | 12.55 |
Protein Annotations
| EnsemblPlants:CDY21590 | EnsemblPlantsGene:GSBRNA2T00016056001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF2 | PFAM:PF00564 | ProteinID:CDY21590 |
| ProteinID:CDY21590.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EEFBDE | UniProt:A0A078G559 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC09g47020DBnaC09g47020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G559]
Coordinates
chrLK032122:-:374845..376461
Molecular Weight (calculated)
53153.0 Da
IEP (calculated)
5.386
GRAVY (calculated)
-0.901
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKFSYNSYP DSAESSPRSR DVDFDNPPPW EDQTQQQQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGD TKILSVDRGI RFPALASKLS AVIGGDGGGE
101: ISFKYQLPGE DLDALISVTN EDDLEHMMHE YDRLLRMSSK PARMRLFLFP LSSPVSGGGF GSEGSTKSDR EMVNTIPNRP ESEKSVTAPA SNADFLFGSE
201: KVVVAPPAPP SPTQQIIQDP QMFVNQQVIT PEQHPAEIQR QIHEFQRIQI RDQEHQQQQQ MQQQQLQQEA MYRRKSEDDR YFTPTYAQNP PPPPTTVSQT
301: NQQPPVGYWQ GNNTIPGNNI YTTTSQNLPE QQVYMIPAQS QAPGTLYHNV MRPPTQGNQG YFPPVQQRVQ QHHPDPYMEQ QSQQGYNVVQ PPQPTYSGGP
401: QVMSSGPMGL HETQPYSQMG NPVYYTVAGD GMMVPPQPHQ PQYQGMGQPV SGMTGPDGKL VVNTAPKVSQ SSDSV
101: ISFKYQLPGE DLDALISVTN EDDLEHMMHE YDRLLRMSSK PARMRLFLFP LSSPVSGGGF GSEGSTKSDR EMVNTIPNRP ESEKSVTAPA SNADFLFGSE
201: KVVVAPPAPP SPTQQIIQDP QMFVNQQVIT PEQHPAEIQR QIHEFQRIQI RDQEHQQQQQ MQQQQLQQEA MYRRKSEDDR YFTPTYAQNP PPPPTTVSQT
301: NQQPPVGYWQ GNNTIPGNNI YTTTSQNLPE QQVYMIPAQS QAPGTLYHNV MRPPTQGNQG YFPPVQQRVQ QHHPDPYMEQ QSQQGYNVVQ PPQPTYSGGP
401: QVMSSGPMGL HETQPYSQMG NPVYYTVAGD GMMVPPQPHQ PQYQGMGQPV SGMTGPDGKL VVNTAPKVSQ SSDSV
001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAMYRRKTE DEAGRYFPPT YTQNPAPVTN
301: QQPPVGYWQG NTNNSNIQGN IYTTTSQNLP EQQQQQQQVY MIPAQSQAPG TLYQSVMRPT VQGNQGYYPS PVQRLHHPDA YMEQQNQPGY NVVQPQPTFS
401: GGPQVMTSVG PQVMTSVGPP MGLQEPYSQM GKPVYYTVAG EGMMVQPPPA QPQQQQQQYQ GMGQPVSGMT DLRTGPDGKV AVNMAAPQVS DSV
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAMYRRKTE DEAGRYFPPT YTQNPAPVTN
301: QQPPVGYWQG NTNNSNIQGN IYTTTSQNLP EQQQQQQQVY MIPAQSQAPG TLYQSVMRPT VQGNQGYYPS PVQRLHHPDA YMEQQNQPGY NVVQPQPTFS
401: GGPQVMTSVG PQVMTSVGPP MGLQEPYSQM GKPVYYTVAG EGMMVQPPPA QPQQQQQQYQ GMGQPVSGMT DLRTGPDGKV AVNMAAPQVS DSV
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.