CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13033

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64430.1	EES13033	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051939_P001	Maize	cytosol	81.8	86.06
Zm00001d018447_P001	Maize	extracellular	83.22	85.95
TraesCS6A01G380500.1	Wheat	cytosol	63.07	67.11
TraesCS6D01G365200.1	Wheat	cytosol	57.95	67.08
TraesCS6B01G419500.1	Wheat	cytosol	57.95	66.53
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	63.25	64.97
KRH57272	Soybean	cytosol	8.66	53.26
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	24.56	46.8
VIT_14s0068g01740.t01	Wine grape	cytosol	6.01	46.58
VIT_17s0000g07170.t01	Wine grape	cytosol	12.72	41.14
VIT_02s0033g00640.t01	Wine grape	cytosol	12.37	40.0
CDY31319	Canola	nucleus	19.26	39.07
PGSC0003DMT400016330	Potato	nucleus	30.74	37.91
VIT_18s0001g08010.t01	Wine grape	nucleus	32.86	37.88
VIT_03s0097g00600.t01	Wine grape	nucleus	30.74	37.26
Solyc04g076820.1.1	Tomato	plastid	30.92	36.92
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	25.44	34.78
PGSC0003DMT400008036	Potato	nucleus	29.86	34.42
Solyc01g106320.2.1	Tomato	extracellular	29.86	34.28
KRH49860	Soybean	nucleus	28.27	33.83
Solyc02g091670.1.1	Tomato	cytosol	16.08	33.7
PGSC0003DMT400078796	Potato	cytosol	16.08	33.7
KRH42038	Soybean	cytosol	28.09	33.4
KRH16903	Soybean	nucleus	20.49	32.77
KRH21700	Soybean	nucleus	25.44	32.73
CDY46804	Canola	nucleus	27.21	32.35
Bra031918.1-P	Field mustard	nucleus	27.03	32.28
Bra024295.1-P	Field mustard	nucleus	24.56	32.03
AT5G64430.1	Thale cress	nucleus	28.98	31.97
KRH10652	Soybean	cytosol	24.91	31.61
GSMUA_Achr1P05710_001	Banana	cytosol	26.5	30.8
CDY58263	Canola	nucleus	25.97	30.69
KRH72507	Soybean	cytosol, nucleus, peroxisome	19.43	30.64
CDX84525	Canola	nucleus	25.97	30.31
CDY21590	Canola	nucleus	25.09	29.89
CDX69896	Canola	nucleus	24.56	29.57
Bra009393.1-P	Field mustard	nucleus	24.73	29.54
AT5G09620.1	Thale cress	nucleus	25.62	27.31
EER99518	Sorghum	plastid	17.67	25.51
EES09698	Sorghum	cytosol	10.25	24.58
OQU91169	Sorghum	cytosol	9.72	22.63
KXG37809	Sorghum	cytosol	9.19	22.51
OQU78054	Sorghum	cytosol	12.19	18.85
KXG37356	Sorghum	nucleus	11.48	18.73
EES00348	Sorghum	nucleus	18.37	15.69

Protein Annotations

MapMan:35.2	UniProt:C5XV79	EnsemblPlants:EES07730	ProteinID:EES07730	ProteinID:EES07730.2	GO:GO:0003674
GO:GO:0003774	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008150	GO:GO:0008574
GO:GO:0009987	GO:GO:0016787	InterPro:IPR000270	InterPro:PB1_dom	PFAM:PF00564	PANTHER:PTHR31066
PANTHER:PTHR31066:SF5	SMART:SM00666	EnsemblPlantsGene:SORBI_3004G340100	SUPFAM:SSF54277	unigene:Sbi.6637	UniParc:UPI0007F2BCF1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:67196925..67198727

Molecular Weight (calculated)

58758.8 Da

IEP (calculated)

6.303

GRAVY (calculated)

-0.365

Length

566 amino acids

Sequence
(BLAST)

001: MAESGDSSPN SAAATEDSHH EASEAAAAAA AAAAVHAQPA PQPRPPPPPS KVRLMVSYGG RIQPRPHDNQ LAYVNGETKI LSLERPLVFA DFAARLAALS
101: GNAGDVCVKY QLPGEDLDAL VSVTNDEDLE HLVLEYDRLH LQRPATASSA GSGSGSGSSR GGSTLRLRVF LFPVQSPQLP PPPPQPAGLL EPKAEQRHWF
201: VEALNTVPLP PSKQDPPPVP PQQSSPPQQH KQESVFPQQS PPQAKHEAVF VQQAPPQPHT VVQMPPPPQQ QLAHVVLAAA SPDYLFGLDN GFVPPPAVKV
301: KDPAGDPPTV RENVPVEIAA KNDDRHPNPN AGDHVAVSPV VSPAKYQRQI QELEKLQVAD NATHQPPPPA AAPAPAPAPS LVPVPVPAAL PRNGSDDSLT
401: RAYPPATATP TANAEYYLPK FPEKPPVPPP SSAPPATAYL QVQGRYASVA PGSGADHGPV FFIPAPHGYF AATASPGATS YPAVYAVAPP SATPTANGSA
501: PPSPAVSSAT AYAPAPTQVA YDSNGRAIYY TSMLPQYPSA VNGMSAAGAV LGTEPAKPVA VKPTVS

Best Arabidopsis Sequence Match ( AT5G64430.1 )
(BLAST)

001: MEKFSYNSYP DSTDSSPRSR EIEFDNPPPP WDDQNQNQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGE TKILSVDRGI RFPVLASKLS TVCGGGDGGG
101: GEVTFKYQLP GEDLDALISV TNDDDLEHMM HEYDRLLRLS SKPARMRLFL FPASSGFGSQ SSTQSDRDRF VEALNTVPRL SESEKSVTAP PNNADFLFGS
201: EKVAAPPPPP PAEVKLPVPV ALEPPLFNDP RVIQPDHVVN PMEIQRQMQE FQRMHIRDQE QQQQQEAVYR RKSNEDGLIE TGGGYFSPPY IQNPAPPPPQ
301: QTIPQTNPQA PPMTTFWQGN HNPGVVFPTT THGLGLPEQP VYMIPSPSPS PVYHAPPPPQ PQGVIRPILT GQVNQGGYYP QVQRVASDTY REPHQSPYNV
401: AQPLQAPIGT KAAQQQQPPP PQPFTSGPPP PQYTAVPPPR QVVGLPDTSA YTQVTYTGGM GKQVYYTEAP PPQYHGVGLP VTGMSELRTG PDGKLVAMNM
501: APKVSSQSSD SAV

Arabidopsis Description

At5g64430 [Source:UniProtKB/TrEMBL;Acc:Q9FGF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.