CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010214_P003	Maize	cytosol	91.53	85.46
Os05t0427100-01	Rice	cytosol	61.75	61.75
TraesCS1D01G267100.1	Wheat	nucleus	60.38	60.38
TraesCS1A01G266900.1	Wheat	nucleus	59.56	59.73
TraesCS1B01G277800.1	Wheat	cytosol, mitochondrion	60.66	54.68
HORVU1Hr1G065470.6	Barley	mitochondrion	61.2	51.61
KRH26304	Soybean	nucleus	22.4	31.42
CDY21444	Canola	mitochondrion	22.4	31.06
KRH06059	Soybean	nucleus	22.68	30.97
Bra000599.1-P	Field mustard	mitochondrion	22.4	30.94
CDX83177	Canola	mitochondrion	22.4	30.83
Bra022508.1-P	Field mustard	nucleus	22.95	29.79
CDY16375	Canola	nucleus	22.95	29.79
GSMUA_Achr11P...	Banana	plastid	24.86	29.64
AT5G49920.1	Thale cress	nucleus	23.22	29.51
CDX91540	Canola	nucleus	22.68	29.43
GSMUA_Achr3P21900_001	Banana	nucleus	28.69	28.53
PGSC0003DMT400097584	Potato	nucleus	26.5	26.36
KXG37809	Sorghum	cytosol	15.57	24.68
VIT_12s0035g01050.t01	Wine grape	extracellular, golgi	25.96	24.55
OQU91169	Sorghum	cytosol	15.85	23.87
EES09698	Sorghum	cytosol	15.03	23.31
EER99518	Sorghum	plastid	16.12	15.05
KXG37356	Sorghum	nucleus	12.3	12.97
EES07730	Sorghum	cytosol	18.85	12.19
EES00348	Sorghum	nucleus	19.95	11.01

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.2	EntrezGene:8077142	UniProt:C5YYA4	ProteinID:EES18272.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	ProteinID:KXG22052.1	EnsemblPlants:OQU78054	ProteinID:OQU78054
ProteinID:OQU78054.1	ProteinID:OQU78055.1	ProteinID:OQU78056.1	ProteinID:OQU78057.1	InterPro:PB1_dom	PFAM:PF00564
PANTHER:PTHR31066	PANTHER:PTHR31066:SF8	SMART:SM00666	EnsemblPlantsGene:SORBI_3009G145900	SUPFAM:SSF54277	unigene:Sbi.20109
UniParc:UPI0001A887F4	RefSeq:XP_002439842.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:50294722..50298073

Molecular Weight (calculated)

39328.7 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.428

Length

366 amino acids

Sequence
(BLAST)

001: MAEIEDAMGA PPTVTTTESE GTTTDEDVHL SPTCICGGAG GAGGRRGGGR IKILCSFGGR IVPRPHDGVL KYVGGETRVL AVPRSICFRE LKKKVEDMFK
101: TEVAAIKYQL LSLAEELDVL VSVTCDEDLV HMLDEYDRLE AKRSPTTSPR FRVYVFTPQA AAAAAPTVLP SSARYAGLSR LHPHHHHHHQ QQHHHFQPEE
201: RYVATVPASP DGSPPFSAQT HGAVSAGNSP RANPPTVFGF GMQRVRSSPN LSTLDAAAQR LHQHGVDGSI PGYVSGSPRH AGAGPGPGPM LLQNNFHHYQ
301: QYPPAPVPVP VPVQHHGGGR YDARGYVRVG NYMAPMVPAT RPLSRGGPPP PHSEMVTPKK SAIVWD

Best Arabidopsis Sequence Match ( AT5G49920.1 )
(BLAST)

001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL

Arabidopsis Description

At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.