Factsheet for Bra000599.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
extracellular 1
cytosol 1
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83177	Canola	mitochondrion	98.87	98.5
Bra022508.1-P	Field mustard	nucleus	80.38	75.53
AT5G49920.1	Thale cress	nucleus	75.47	69.44
KRH26304	Soybean	nucleus	42.64	43.3
KRH06059	Soybean	nucleus	43.4	42.91
Bra032936.1-P	Field mustard	plastid	23.77	35.2
Bra016197.1-P	Field mustard	mitochondrion	21.89	34.94
Bra025209.1-P	Field mustard	mitochondrion	22.64	33.15
PGSC0003DMT400097584	Potato	nucleus	45.66	32.88
VIT_12s0035g01050.t01	Wine grape	extracellular, golgi	45.28	31.01
Bra018071.1-P	Field mustard	plastid	21.13	30.6
Bra038608.1-P	Field mustard	nucleus	21.51	29.38
Bra035855.1-P	Field mustard	cytosol	21.13	29.32
GSMUA_Achr11P...	Banana	plastid	29.81	25.73
GSMUA_Achr3P21900_001	Banana	nucleus	34.34	24.73
TraesCS1A01G266900.1	Wheat	nucleus	32.08	23.29
TraesCS1D01G267100.1	Wheat	nucleus	32.08	23.22
Os05t0427100-01	Rice	cytosol	31.32	22.68
OQU78054	Sorghum	cytosol	30.94	22.4
Zm00001d010214_P003	Maize	cytosol	31.32	21.17
TraesCS1B01G277800.1	Wheat	cytosol, mitochondrion	32.08	20.94
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.25	19.62
HORVU1Hr1G065470.6	Barley	mitochondrion	32.08	19.59
Bra024295.1-P	Field mustard	nucleus	25.66	15.67
Bra029559.1-P	Field mustard	nucleus	23.02	15.44
Bra031918.1-P	Field mustard	nucleus	26.79	14.98
Bra018513.1-P	Field mustard	nucleus	24.53	14.64
Bra009393.1-P	Field mustard	nucleus	24.15	13.5
Bra006344.1-P	Field mustard	plastid	17.74	13.24
Bra022297.1-P	Field mustard	nucleus	23.77	10.99
Bra022296.1-P	Field mustard	cytosol	24.15	10.81
Bra008633.1-P	Field mustard	plastid	19.62	10.72
Bra037596.1-P	Field mustard	nucleus	23.4	9.64
Bra017462.1-P	Field mustard	cytosol, plastid	22.64	9.35
Bra024899.1-P	Field mustard	nucleus, plastid	24.15	8.82

Protein Annotations

EnsemblPlants:Bra000599.1	EnsemblPlants:Bra000599.1-P	EnsemblPlantsGene:Bra000599	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF13	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002540190	UniProt:M4C8S1	MapMan:35.2

Description

AT5G49920 (E=6e-091) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA03:-:11991972..11992846

Molecular Weight (calculated)

30044.8 Da

IEP (calculated)

9.260

GRAVY (calculated)

-0.757

Length

265 amino acids

Sequence
(BLAST)

001: MSIGGRSKVK FMCSFGGKIL PRPSDGLLKY VGGETRVIAV SPDITFLELT KKLTEMTEND MVLKYQIIPE DLDALVSVKS DEDLKHMMDE YNRHQETPKL
101: RTFLFPTVQL CSPMEPQTIE QRYIEAINGI VRKIKTRPSF TLSASSSPKS ESSPDGYGNE QPEMGGSYQL SRLYPMHRVR SSPNISQQQH NYHHHHHHSA
201: YFQQPNYLTC RLRPPPPPPL DFPRGAGWGD PQGGGNGKYG CSEERRFWGR ASSVPQSPRN HGFRL

Best Arabidopsis Sequence Match ( AT5G49920.1 )
(BLAST)

001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL

Arabidopsis Description

At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.