Factsheet for Bra032936.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48987	Canola	plastid	98.32	98.32
CDY28543	Canola	plastid	94.41	96.02
Bra025209.1-P	Field mustard	mitochondrion	88.83	87.85
VIT_00s0291g00050.t01	Wine grape	plastid	62.01	56.92
Bra016197.1-P	Field mustard	mitochondrion	50.28	54.22
KRH29762	Soybean	plastid	34.64	52.1
KRH69636	Soybean	plastid	56.42	47.64
GSMUA_Achr3P19440_001	Banana	plastid	42.46	47.2
KRH74522	Soybean	nucleus	58.1	45.02
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	55.87	42.55
GSMUA_Achr10P...	Banana	cytosol	48.6	42.23
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	50.84	41.74
Solyc05g013530.2.1	Tomato	plastid	50.84	41.55
Bra018071.1-P	Field mustard	plastid	41.9	40.98
Bra038608.1-P	Field mustard	nucleus	43.02	39.69
GSMUA_Achr8P16400_001	Banana	plastid	44.13	39.11
Bra035855.1-P	Field mustard	cytosol	40.22	37.7
TraesCS6D01G198500.1	Wheat	plastid	41.9	37.5
Os11t0444900-01	Rice	cytosol, plastid	45.25	37.5
TraesCS6A01G217000.1	Wheat	plastid	41.9	37.31
TraesCS6B01G245800.1	Wheat	plastid	40.78	36.87
Os11t0444700-01	Rice	cytosol	44.69	35.71
GSMUA_Achr6P06660_001	Banana	plastid	48.04	35.54
EES09698	Sorghum	cytosol	44.13	33.47
HORVU6Hr1G055230.3	Barley	cytosol	40.78	31.33
Zm00001d049157_P001	Maize	plastid	36.87	28.95
Bra000599.1-P	Field mustard	mitochondrion	35.2	23.77
Bra022508.1-P	Field mustard	nucleus	36.31	23.05
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	29.05	20.0
Bra024295.1-P	Field mustard	nucleus	32.96	13.59
Bra006344.1-P	Field mustard	plastid	25.7	12.96
Bra009393.1-P	Field mustard	nucleus	33.52	12.66
Bra029559.1-P	Field mustard	nucleus	27.37	12.41
Bra031918.1-P	Field mustard	nucleus	32.4	12.24
Bra018513.1-P	Field mustard	nucleus	27.93	11.26
Bra008633.1-P	Field mustard	plastid	27.37	10.1
Bra017462.1-P	Field mustard	cytosol, plastid	35.75	9.97
Bra022297.1-P	Field mustard	nucleus	30.73	9.6
Bra022296.1-P	Field mustard	cytosol	31.28	9.46
Bra037596.1-P	Field mustard	nucleus	31.28	8.71
Bra024899.1-P	Field mustard	nucleus, plastid	35.2	8.68

Protein Annotations

EnsemblPlants:Bra032936.1	EnsemblPlants:Bra032936.1-P	EnsemblPlantsGene:Bra032936	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002545996	UniProt:M4EVV3	MapMan:35.2

Description

AT3G26510 (E=3e-054) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA02:+:22426164..22426803

Molecular Weight (calculated)

19577.3 Da

IEP (calculated)

9.450

GRAVY (calculated)

-0.393

Length

179 amino acids

Sequence
(BLAST)

001: MVTNSTIKFL CSYGGKILPR YPDGKLRYNG GHTRVLAVPR SVSFSELASK MTEMCGSTVT IRCQLPTEDL DALVSVTSDE DLANLIEEYD LVSSSSPMKI
101: RVFLNPPKST IAPPRLALPS SNTSSSSSTS SSPRSPSMSK PPLPPSPPRL TTAKNQCYGC YVHRNSRNVY LVHNGNHWQ

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.