Factsheet for Bra025209.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13638	Canola	mitochondrion	100.0	100.0
Bra032936.1-P	Field mustard	plastid	87.85	88.83
VIT_00s0291g00050.t01	Wine grape	plastid	58.56	54.36
Bra016197.1-P	Field mustard	mitochondrion	46.96	51.2
KRH29762	Soybean	plastid	33.15	50.42
KRH69636	Soybean	plastid	54.14	46.23
GSMUA_Achr3P19440_001	Banana	plastid	39.78	44.72
KRH74522	Soybean	nucleus	55.25	43.29
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	54.14	41.7
Solyc05g013530.2.1	Tomato	plastid	50.28	41.55
GSMUA_Achr10P...	Banana	cytosol	46.41	40.78
Bra018071.1-P	Field mustard	plastid	40.33	39.89
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	46.96	38.99
Bra038608.1-P	Field mustard	nucleus	39.78	37.11
Os11t0444900-01	Rice	cytosol, plastid	43.09	36.11
TraesCS6B01G245800.1	Wheat	plastid	39.23	35.86
Bra035855.1-P	Field mustard	cytosol	37.57	35.6
TraesCS6D01G198500.1	Wheat	plastid	39.23	35.5
TraesCS6A01G217000.1	Wheat	plastid	39.23	35.32
GSMUA_Achr8P16400_001	Banana	plastid	39.23	35.15
GSMUA_Achr6P06660_001	Banana	plastid	46.41	34.71
Os11t0444700-01	Rice	cytosol	41.99	33.93
EES09698	Sorghum	cytosol	43.09	33.05
HORVU6Hr1G055230.3	Barley	cytosol	38.67	30.04
Zm00001d049157_P001	Maize	plastid	35.91	28.51
Bra000599.1-P	Field mustard	mitochondrion	33.15	22.64
Bra022508.1-P	Field mustard	nucleus	34.81	22.34
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.18	19.62
Bra006344.1-P	Field mustard	plastid	25.97	13.24
Bra024295.1-P	Field mustard	nucleus	31.49	13.13
Bra029559.1-P	Field mustard	nucleus	26.52	12.15
Bra009393.1-P	Field mustard	nucleus	31.49	12.03
Bra031918.1-P	Field mustard	nucleus	30.94	11.81
Bra018513.1-P	Field mustard	nucleus	27.62	11.26
Bra008633.1-P	Field mustard	plastid	27.62	10.31
Bra022297.1-P	Field mustard	nucleus	32.6	10.3
Bra022296.1-P	Field mustard	cytosol	33.15	10.14
Bra017462.1-P	Field mustard	cytosol, plastid	33.7	9.5
Bra037596.1-P	Field mustard	nucleus	33.15	9.33
Bra024899.1-P	Field mustard	nucleus, plastid	35.36	8.82

Protein Annotations

EnsemblPlants:Bra025209.1	EnsemblPlants:Bra025209.1-P	EnsemblPlantsGene:Bra025209	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000253F696	UniProt:M4E8V3	MapMan:35.2

Description

AT3G26510 (E=3e-055) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA06:+:22771030..22771672

Molecular Weight (calculated)

19709.6 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.273

Length

181 amino acids

Sequence
(BLAST)

001: MVTNSTIKLL CSYGGKILPR YPDGKLRYNG GHTRVLAVPR SVSFSELASK MAEMFGSAVT IRCQLPTEDL DALVSITCDE DLANLIEEYD LVSSSMKVRV
101: FLNPPKSVKS TVSPPPLALP ASTSSSASST SSSPRSPSLS KPPLPPSPPR LTTVKNQCYG CYVHHRSSRN MYLVHNGNHW Q

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.