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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022296.1-P Field mustard cytosol 100.0 96.79
CDY40994 Canola cytosol 88.31 88.77
Bra037596.1-P Field mustard nucleus 77.84 69.36
AT3G18230.1 Thale cress nucleus, plastid 73.3 63.06
Zm00001d003965_P001 Maize mitochondrion 9.95 51.82
HORVU3Hr1G008310.1 Barley cytosol 11.87 47.55
GSMUA_AchrUn_... Banana nucleus 25.48 37.82
GSMUA_Achr10P... Banana nucleus 21.47 36.39
Bra010988.1-P Field mustard cytosol, nucleus, plasma membrane 16.4 36.15
KRH39133 Soybean cytosol 41.36 35.43
KRH48572 Soybean cytosol 39.09 34.95
VIT_17s0000g03180.t01 Wine grape nucleus 38.57 34.64
PGSC0003DMT400014442 Potato nucleus 40.14 33.58
Solyc03g118870.2.1 Tomato nucleus 37.17 33.44
Bra025209.1-P Field mustard mitochondrion 10.3 32.6
Bra024899.1-P Field mustard nucleus, plastid 39.62 31.27
GSMUA_Achr8P18320_001 Banana nucleus 27.92 30.89
Bra032936.1-P Field mustard plastid 9.6 30.73
GSMUA_Achr2P07240_001 Banana nucleus 28.97 30.18
Bra017462.1-P Field mustard cytosol, plastid 33.68 30.06
Bra016197.1-P Field mustard mitochondrion 8.55 29.52
Bra038608.1-P Field mustard nucleus 9.42 27.84
Bra029559.1-P Field mustard nucleus 19.02 27.59
Bra018071.1-P Field mustard plastid 8.73 27.32
GSMUA_Achr1P21240_001 Banana nucleus 28.27 27.0
GSMUA_Achr11P... Banana plasma membrane, vacuole 31.76 26.0
Zm00001d039916_P010 Maize nucleus 29.67 25.8
Bra018513.1-P Field mustard nucleus 19.72 25.45
Bra006344.1-P Field mustard plastid 15.71 25.35
EES00348 Sorghum nucleus 29.32 25.34
Os01t0139200-01 Rice nucleus 29.32 25.04
Zm00001d008591_P001 Maize mitochondrion 28.97 24.96
Bra035855.1-P Field mustard cytosol 8.2 24.61
TraesCS3D01G050900.1 Wheat nucleus 28.45 24.59
Bra000599.1-P Field mustard mitochondrion 10.99 23.77
TraesCS3B01G060500.1 Wheat cytosol 27.23 23.57
TraesCS3A01G051800.1 Wheat nucleus 28.8 23.44
Bra022508.1-P Field mustard nucleus 11.52 23.4
GSMUA_Achr6P09850_001 Banana endoplasmic reticulum, extracellular 28.45 23.19
Bra008633.1-P Field mustard plastid 19.02 22.47
HORVU3Hr1G008420.4 Barley cytosol, nucleus 28.97 19.62
Bra024295.1-P Field mustard nucleus 13.96 18.43
Bra031918.1-P Field mustard nucleus 15.01 18.14
Bra009393.1-P Field mustard nucleus 13.96 16.88
Protein Annotations
EnsemblPlants:Bra022297.1EnsemblPlants:Bra022297.1-PEnsemblPlantsGene:Bra022297Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR000270InterPro:PB1_domPANTHER:PTHR31066PANTHER:PTHR31066:SF27PFAM:PF00564
PFscan:PS51745SEG:segSMART:SM00666SUPFAM:SSF54277UniParc:UPI0002547362UniProt:M4E0K0
MapMan:35.2:::::
Description
AT3G18230 (E=3e-162) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Coordinates
chrA05:-:18552516..18554689
Molecular Weight (calculated)
62948.3 Da
IEP (calculated)
5.138
GRAVY (calculated)
-0.462
Length
573 amino acids
Sequence
(BLAST)
001: MVDGSPRAVA LDTELLASVP DIKLRLMCSF GGHIMPRPHD MALTYSSGET RLVVVDRRSS LASLRSRLST MLLNGRSFTL KYQLPNEDLD SLVTITTDED
101: LENMIEEYDR ATSSATTRAT HRIRLFLFAN KLETAATMGS LLNSAKSETW FVDALNQPGL LPRGLSDSAA VNNTLVNLDE ETDVQELETD VGGENNKRGD
201: YITNNVMSHQ EMHMSSMPDS PMLDTTGGSS SSSPSTANLP PIHVRVSEEQ FTQMSFSNVH TQRPLEDGIG LMENQPMMVY NNAPIDNVTA VRNCQASSDD
301: DRSDPSVMVG YKKPPLPMQP LLIPLRGAGG YGLTSPDSIA SDTSISSATS VSKPLYYQEQ APAIPKVPIT QPETTLVQTS HGIPPHETTP VQTTPLILSQ
401: SGTYTTVDQQ HQLPVQQSIL HQGVQYIPHP SQCIPVYSHQ QQNYPVYVMS VPQSQQYVPS RTPPLYPNPR PEAGQNVYQA VISQNPQVHQ IQQQQLQQPL
501: QQPHHQYMSY SGGPVETMYF HAQRPPVSNA IPLVSPYQSM TPAAAAAALA DMSKQMTLNN DKEQQNMAAS QPL
Best Arabidopsis Sequence Match ( AT3G18230.1 )
(BLAST)
001: METPLPPLSQ LTPNPTPAAA VSSAIPAPVK SVAVQQPIDG SPRAVATDTG GIPEPLAAVP GAKLRLMCSF GGHIMPRPHD KSLTYSGGET RIVVVDRRAS
101: LSSLRSRLSS MLLNGRSFTL KYQLPSEDLD SLVTITTDED LENMIEEYDR AASSATATAT QRLRLFLFAN KLETAATMGS LLDGTKSDTW FVDALNQSGL
201: LPRGLSDSAA VNNTLVNLDE ASGGETEIQN LETNVGGENN KRGDLVANGV ISHQEMHMSS MPDSPMMEAA GSSIGSSSSS PSTSNLPPIR VRVSEDQRIE
301: EQLAQMTFSN MQTQRQFDDG VSLMANRPMM IPPGAMNDAA MAYNNAPGDG TAPASNGHVS PEDDRSELGV STGYRKPPLP MQPVTIPPRT VGGYGLTSPD
401: SVASDTSISS ATSFSKPMYY QDQPPALPRA PPVAQPETTS AQSSQVLPQT ENTSAQTTSH VLSQPGTYTT MDQQQQQPLA QQPFLHQGVQ YIPHPSQYIP
501: IYSHQQQNYP VYVMSVPQSQ QYIPAGTPPL YPNSKPGTNS RPEAAQNVYR AAPPQVIQLQ QQHQYMGYAG APQHSTNANA NYGTGAPQHS TNANANYGGP
601: FEYTNSPNET VYYHTQAPAA NTAIPLASPY QSMTPAAAAA ALADMSKQMA LDGGKQQQHM AASQPL
Arabidopsis Description
At3g18230 [Source:UniProtKB/TrEMBL;Acc:Q9LJQ7]
SUBAcon: [nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.