Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016016_P001 | |
| Zm00001d018530_P001 | |
| Zm00001d043386_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01190.1 | Zm00001d016016_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d043386_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d018530_P001 | AT5G08330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00348 | Sorghum | nucleus | 93.32 | 92.76 |
| Zm00001d008591_P001 | Maize | mitochondrion | 92.11 | 91.28 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 19.42 | 89.51 |
| Zm00001d003965_P001 | Maize | mitochondrion | 14.72 | 88.18 |
| Os01t0139200-01 | Rice | nucleus | 81.49 | 80.03 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 75.72 | 70.88 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 70.71 | 70.29 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 69.5 | 69.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.96 | 61.4 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 76.18 | 59.34 |
| GSMUA_Achr10P... | Banana | nucleus | 28.68 | 55.92 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 41.12 | 52.32 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 43.1 | 51.64 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 51.44 | 48.43 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 43.85 | 48.17 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 48.1 | 45.09 |
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.72 | 37.31 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 14.57 | 37.07 |
| VIT_01s0011g04140.t01 | Wine grape | nucleus | 38.39 | 36.3 |
| CDY24410 | Canola | cytosol | 14.11 | 36.05 |
| VIT_17s0000g03180.t01 | Wine grape | nucleus | 34.6 | 35.74 |
| KRH35888 | Soybean | nucleus | 36.87 | 34.37 |
| Solyc05g008830.2.1 | Tomato | nucleus | 32.93 | 33.75 |
| KRG90906 | Soybean | nucleus, plastid | 36.57 | 33.43 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 13.66 | 33.09 |
| PGSC0003DMT400015310 | Potato | nucleus | 32.93 | 32.93 |
| CDY25942 | Canola | nucleus, plastid | 31.26 | 32.8 |
| Bra017462.1-P | Field mustard | cytosol, plastid | 31.87 | 32.71 |
| CDY41073 | Canola | nucleus, plastid | 31.26 | 32.65 |
| Solyc03g118870.2.1 | Tomato | nucleus | 31.41 | 32.5 |
| KRH48572 | Soybean | cytosol | 31.56 | 32.45 |
| Solyc04g007460.2.1 | Tomato | plastid | 33.38 | 32.26 |
| KRH38173 | Soybean | nucleus | 31.87 | 32.21 |
| KRH39133 | Soybean | cytosol | 32.32 | 31.84 |
| PGSC0003DMT400014442 | Potato | nucleus | 32.78 | 31.53 |
| CDY68695 | Canola | nucleus | 26.25 | 31.45 |
| Zm00001d006574_P001 | Maize | plastid | 17.75 | 31.2 |
| Bra024899.1-P | Field mustard | nucleus, plastid | 34.29 | 31.13 |
| VIT_14s0006g02490.t01 | Wine grape | nucleus | 24.43 | 31.02 |
| AT2G01190.1 | Thale cress | nucleus, plastid | 33.84 | 30.97 |
| Zm00001d021746_P001 | Maize | plastid | 17.91 | 30.81 |
| CDY17690 | Canola | nucleus, plastid | 33.38 | 30.39 |
| Solyc02g086360.2.1 | Tomato | cytosol | 25.49 | 30.16 |
| PGSC0003DMT400067817 | Potato | cytosol | 25.34 | 29.98 |
| CDY40994 | Canola | cytosol | 25.8 | 29.82 |
| CDY24442 | Canola | cytosol | 25.8 | 29.77 |
| Bra022297.1-P | Field mustard | nucleus | 25.8 | 29.67 |
| CDX92217 | Canola | cytosol | 26.25 | 29.52 |
| Bra022296.1-P | Field mustard | cytosol | 26.4 | 29.39 |
| Bra037596.1-P | Field mustard | nucleus | 28.38 | 29.08 |
| CDY66514 | Canola | nucleus | 28.38 | 29.04 |
| Zm00001d033571_P001 | Maize | cytosol | 7.13 | 29.01 |
| AT3G18230.1 | Thale cress | nucleus, plastid | 29.29 | 28.98 |
| Bra006344.1-P | Field mustard | plastid | 15.48 | 28.73 |
| AT5G16220.1 | Thale cress | plastid | 19.58 | 27.1 |
| CDX70680 | Canola | plastid | 18.66 | 26.68 |
| CDX78676 | Canola | plastid | 17.91 | 26.28 |
| CDX69461 | Canola | plastid | 19.12 | 25.98 |
| Bra008633.1-P | Field mustard | plastid | 19.12 | 25.98 |
| Zm00001d049157_P001 | Maize | plastid | 8.8 | 25.44 |
| Zm00001d033564_P001 | Maize | cytosol, plastid | 9.1 | 25.0 |
| Zm00001d051939_P001 | Maize | cytosol | 15.93 | 19.52 |
| Zm00001d018447_P001 | Maize | extracellular | 16.09 | 19.34 |
| Zm00001d010214_P003 | Maize | cytosol | 11.08 | 18.62 |
Protein Annotations
| EnsemblPlants:Zm00001d039916_P010 | EnsemblPlants:Zm00001d039916_T010 | EnsemblPlantsGene:Zm00001d039916 | EntrezGene:103649801 | Gene3D:3.10.20.90 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 |
| PFAM:PF00564 | ProteinID:ONM30158.1 | ProteinID:ONM30159.1 | ProteinID:ONM30163.1 | SEG:seg | SMART:SM00666 |
| SUPFAM:SSF54277 | UniParc:UPI0002211A70 | UniProt:A0A096SVP6 | MapMan:35.2 | : | : |
Description
Octicosapeptide/Phox/Bem1p family protein
Coordinates
chr3:+:19336005..19339187
Molecular Weight (calculated)
69628.0 Da
IEP (calculated)
6.200
GRAVY (calculated)
-0.545
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPLPSATAA GVGGPGPGYP ESTESSPRSR GGDSWDEPFP SSAAAAAAAA GGGGRLRLMC SFGGRIVPRP TDKSLCYLGG ETRIVAVDRH ASLADVHARL
101: SRSLLGGRPF TLKYQLPNED LDSLISVSTD EDLDNLVDEY DRIAATSSGG GTSRTSRIRL FLFPAKPESS SSLGSLLDDS SKSENWFVDA LNSAISGSLD
201: GIPRGISTDS ASVNCLLGLE DDSSVHSRSG VTNSAPTEDQ RASQPKLQAG AAAAAVGTGR HPHDVQSVPD SPMLDKNSSF GSTSSAPSLS NLPPIRVRPE
301: DRPSDARIMQ PTAVEDHFAQ MGISEQQLPM YIQAQQQVPI PAMTGMSPSE ASSRMFSDDD KSDHGGGGGR KPQPPKQDVP PVVDPTNRAV YYNDRSPPAE
401: LKRDMPVGTE AASYRLPVSA PDAAAAAAAT AATQAPPGYV LAQMHAPPPP QQPPPQQQPQ QPAPQQIVAA GNQHFIHNPA TGTFIPIQSY YHHPVHQQAP
501: QTMQRQQQAP TFDPNTGMYY VPMQQNAHQA YGVPPGAQVT LPPPTLVDTT PKPTVPIPQM AVRPELQQPG VYRTTAAATP APAPNAAPGY AGMAYHHVIQ
601: SHHHHHPAPQ PVANMAGNYG YEFADPTRPQ VYYSQAAAPP TLPQYPPIVS PDAGQAEKH
101: SRSLLGGRPF TLKYQLPNED LDSLISVSTD EDLDNLVDEY DRIAATSSGG GTSRTSRIRL FLFPAKPESS SSLGSLLDDS SKSENWFVDA LNSAISGSLD
201: GIPRGISTDS ASVNCLLGLE DDSSVHSRSG VTNSAPTEDQ RASQPKLQAG AAAAAVGTGR HPHDVQSVPD SPMLDKNSSF GSTSSAPSLS NLPPIRVRPE
301: DRPSDARIMQ PTAVEDHFAQ MGISEQQLPM YIQAQQQVPI PAMTGMSPSE ASSRMFSDDD KSDHGGGGGR KPQPPKQDVP PVVDPTNRAV YYNDRSPPAE
401: LKRDMPVGTE AASYRLPVSA PDAAAAAAAT AATQAPPGYV LAQMHAPPPP QQPPPQQQPQ QPAPQQIVAA GNQHFIHNPA TGTFIPIQSY YHHPVHQQAP
501: QTMQRQQQAP TFDPNTGMYY VPMQQNAHQA YGVPPGAQVT LPPPTLVDTT PKPTVPIPQM AVRPELQQPG VYRTTAAATP APAPNAAPGY AGMAYHHVIQ
601: SHHHHHPAPQ PVANMAGNYG YEFADPTRPQ VYYSQAAAPP TLPQYPPIVS PDAGQAEKH
001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.