Factsheet for PGSC0003DMT400067817

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g086360.2.1	Tomato	cytosol	96.59	96.59
Zm00001d003965_P001	Maize	mitochondrion	9.87	50.0
VIT_14s0006g02490.t01	Wine grape	nucleus	43.81	47.01
HORVU3Hr1G008310.1	Barley	cytosol	11.85	46.15
GSMUA_AchrUn_...	Banana	nucleus	23.16	33.42
GSMUA_Achr10P...	Banana	nucleus	19.93	32.84
PGSC0003DMT400015310	Potato	nucleus	36.8	31.11
PGSC0003DMT400069641	Potato	mitochondrion	9.52	30.64
Bra006344.1-P	Field mustard	plastid	18.85	29.58
GSMUA_Achr8P18320_001	Banana	nucleus	26.93	28.96
AT5G16220.1	Thale cress	plastid	24.06	28.15
CDX78676	Canola	plastid	22.62	28.06
PGSC0003DMT400014442	Potato	nucleus	34.29	27.88
CDX70680	Canola	plastid	22.98	27.77
GSMUA_Achr2P07240_001	Banana	nucleus	27.29	27.64
Bra008633.1-P	Field mustard	plastid	23.88	27.42
CDX69461	Canola	plastid	23.7	27.22
Zm00001d039916_P010	Maize	nucleus	29.98	25.34
PGSC0003DMT400057688	Potato	nucleus	18.85	25.24
GSMUA_Achr1P21240_001	Banana	nucleus	27.11	25.17
Zm00001d008591_P001	Maize	mitochondrion	29.98	25.11
EES00348	Sorghum	nucleus	29.62	24.89
PGSC0003DMT400046652	Potato	plastid	8.8	24.75
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	10.23	24.26
Os01t0139200-01	Rice	nucleus	28.55	23.7
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	29.44	23.43
PGSC0003DMT400078796	Potato	cytosol	11.31	23.33
TraesCS3D01G050900.1	Wheat	nucleus	27.47	23.08
TraesCS3A01G051800.1	Wheat	nucleus	29.08	23.01
TraesCS3B01G060500.1	Wheat	cytosol	27.29	22.96
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	27.11	21.48
PGSC0003DMT400016330	Potato	nucleus	16.52	20.04
PGSC0003DMT400097584	Potato	nucleus	13.11	19.84
PGSC0003DMT400008036	Potato	nucleus	17.24	19.55
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	29.62	19.5

Protein Annotations

EnsemblPlants:PGSC0003DMT400067817	EnsemblPlantsGene:PGSC0003DMG400026379	EntrezGene:102581672	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF14	PFAM:PF00564	PGSC:PGSC0003DMG400026379
RefSeq:XP_006357823.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI00029624EF	UniProt:M1CHX1
MapMan:35.2	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026379]

Coordinates

chr2:-:41527351..41530227

Molecular Weight (calculated)

59707.1 Da

IEP (calculated)

5.096

GRAVY (calculated)

-0.345

Length

557 amino acids

Sequence
(BLAST)

001: MDPPSPAPPS TATDSLLDLP PLPTPTTKVR LLCSYGGHIV QRPHDKTLCY AGGDNRVVAV DRRTTISSLS ALSAHLSRTL YGNRPFYLKY QLPDEELDSL
101: ITVTTDEDLQ NMLEEHDRTI TASVTSSRIR LFLFPVKPES LGSALLDSKA DSWFSDALNN TRIARRGQST DSGFGHELIG FENLGGSNSV VSSEGQGDNL
201: SAIGGSAGDA KQTLDFGGGS VPESMVLETS SSFGSTSSSI SMSNIPAIGV QAEDGGVNLQ DKRVRVPSSS ASIESDSIVG STDFQPKVGI HQEPLIQVMS
301: SMASHSLFEA EGSNANPSLI QTPKMVQVSG YPLPQTLDGK HPQPGMQYVH GGACYVPHYP SGPLPVSSCY PFYQVPMQQP QQTPYPLNQQ YPIYLVPMQQ
401: MQSHSMSVLP NINHAAVMAS NRPPLHPQSV INPPSVAYKE VMAAQSVPES GSKVYTTVPT ASLPISAPSQ TQQQYTVLPE PQLISQPVST ASVPAANDAN
501: EFDDDLAYNQ IYKSQPPPPS FISQCQNITK GAAVLLSESS MQMHSNNVMN QAPSHPQ

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.