CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006344.1-P	Field mustard	plastid	74.39	94.08
CDX70680	Canola	plastid	94.21	91.76
CDX69461	Canola	plastid	69.93	64.74
AT5G16220.1	Thale cress	plastid	68.15	64.29
HORVU3Hr1G008310.1	Barley	cytosol	11.36	35.66
Zm00001d003965_P001	Maize	mitochondrion	8.46	34.55
CDY36115	Canola	cytosol, nucleus, vacuole	16.26	28.19
CDX83621	Canola	mitochondrion	11.14	27.62
CDY48987	Canola	plastid	10.91	27.37
CDY28543	Canola	plastid	10.69	27.27
CDY13638	Canola	mitochondrion	10.91	27.07
CDY24410	Canola	cytosol	15.37	26.74
CDY39571	Canola	plastid	10.47	25.68
CDY48161	Canola	plastid	10.24	25.14
CDY41501	Canola	cytosol	10.47	24.87
VIT_14s0006g02490.t01	Wine grape	nucleus	28.73	24.86
CDY61217	Canola	cytosol, mitochondrion	9.13	24.7
CDY66304	Canola	cytosol	9.13	24.7
CDX84387	Canola	nucleus	10.69	24.49
CDY72321	Canola	plastid	9.58	24.02
CDY48129	Canola	cytosol, nucleus, plastid	9.8	23.04
Solyc02g086360.2.1	Tomato	cytosol	28.29	22.8
PGSC0003DMT400067817	Potato	cytosol	28.06	22.62
GSMUA_AchrUn_...	Banana	nucleus	19.15	22.28
CDY31319	Canola	nucleus	13.59	21.86
GSMUA_Achr10P...	Banana	nucleus	16.04	21.3
CDY20093	Canola	extracellular, plasma membrane	9.13	21.13
CDY62874	Canola	nucleus	18.26	20.65
CDX91230	Canola	nucleus	20.27	20.59
CDX97304	Canola	nucleus	20.27	20.5
CDY46377	Canola	nucleus	18.04	20.45
CDY21444	Canola	mitochondrion	11.8	20.08
GSMUA_Achr2P07240_001	Banana	nucleus	24.5	20.0
CDX83177	Canola	mitochondrion	11.8	19.92
CDY16375	Canola	nucleus	12.25	19.5
CDX91540	Canola	nucleus	12.25	19.5
CDY40994	Canola	cytosol	23.83	18.77
CDY24442	Canola	cytosol	23.83	18.74
GSMUA_Achr8P18320_001	Banana	nucleus	21.6	18.73
CDY68695	Canola	nucleus	22.72	18.55
GSMUA_Achr1P21240_001	Banana	nucleus	24.72	18.5
CDX92217	Canola	cytosol	24.05	18.43
CDY46804	Canola	nucleus	19.15	18.07
CDY25942	Canola	nucleus, plastid	25.17	17.99
Zm00001d039916_P010	Maize	nucleus	26.28	17.91
Os01t0139200-01	Rice	nucleus	26.73	17.88
EES00348	Sorghum	nucleus	26.28	17.8
Zm00001d008591_P001	Maize	mitochondrion	26.28	17.74
CDY41073	Canola	nucleus, plastid	24.72	17.59
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	27.39	17.57
CDY66514	Canola	nucleus	24.72	17.24
CDY17690	Canola	nucleus, plastid	27.62	17.13
CDY58263	Canola	nucleus	17.82	16.7
CDX84525	Canola	nucleus	18.04	16.7
TraesCS3A01G051800.1	Wheat	nucleus	25.84	16.48
TraesCS3D01G050900.1	Wheat	nucleus	23.83	16.14
TraesCS3B01G060500.1	Wheat	cytosol	23.61	16.01
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	24.94	15.93
CDY21590	Canola	nucleus	16.7	15.79
CDX69896	Canola	nucleus	16.48	15.74
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	26.06	13.83

Protein Annotations

EnsemblPlants:CDX78676	EnsemblPlantsGene:GSBRNA2T00130101001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF14	PFAM:PF00564	ProteinID:CDX78676	ProteinID:CDX78676.1
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0004EED4B5	MapMan:35.2	:

Description

BnaA03g05880D

Coordinates

chrLK031815:-:1789566..1791535

Molecular Weight (calculated)

49157.7 Da

IEP (calculated)

6.230

GRAVY (calculated)

-0.453

Length

449 amino acids

Sequence
(BLAST)

001: MTTVYSASAT VTEGTKVSPR RSNNNGRNGK LRVICRYGGN IVSQRYVGGD TRIVALPPAA ETSFASLVSH LAATLGVSYD FKVKYQLPDQ ELDSLISVAT
101: DEDVQIMMEE HGYLTCEPSS ASKTRIRLFL FPSKTSEGGG ASQGGLARCK AVADTDWLGR EESKPVLTHP KTETWFVDAL KSAEMMLTGR DLSGDVNGQE
201: SMTQETSSNL GSTSSSASSS ISQVKYSPVE SVTSSSAITQ ISSHDLPTRP HVMENKLSSN MYEDELNKPV QVPVSGYPPY LNQAQQQHTH VVYTGQPYIT
301: GTSPITLPAT TYPHTNHLQY QLPPQPYPIY YSPVDQYSSR HVQAPPVKHN NVLNTHQVDF PMVRTSSPLA TEFPLAPELY PPPKPVDSSV QTSSEAVLRD
401: DHIYNIDHLD DDTVCAQIYK TQPPAPIIPS QLQTMMLTEA LGKLRIHNG

Best Arabidopsis Sequence Match ( AT5G16220.1 )
(BLAST)

001: MTTVSSAFAT VAEGAKVVTP RWKKNERNGK LRVMCRYGGS IVSPPQTKSP RYVGGDTRIV AIPSSAETSF ASLVSHLTVT LKISYPFKVK YQLPDQELDS
101: LISVEADEDV QIMMEEHGYL SSESSIPQSR IRLFLFPLKS QQSNEAGASQ GDSDQCKVET DIDWLGIEES NKPIREELTQ PVLQHPKTEM WFVDALKSVE
201: MMQTRRTNSG TSGSGDGNGG ICGQESMMLE TNSSFGSTSS SVSSSNLPPI KSSGEDNIAN SQVKFAPIES VTSNDNSAVT PIPSHELPSH SHAFENKPSS
301: NLYVAELNRP VPVPISGYPP FMNQAQQQHI QVIYTGQPYI TGNSPMTLPA TAYHHTNHVY YQRPPQPYPI YYIPVEQYSS RHVQALPVKP STVLNYHQVD
401: SPVVRTSSPL APEFSSQVYP LSKPVDSSVQ TSSEATLNTT SRDAFIYNTD VDDDNDIAHA QIYKSQPPAP TLPSQY

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9LF06]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.