Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016016_P001 | |
| Zm00001d018530_P001 | |
| Zm00001d043386_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01190.1 | Zm00001d016016_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d043386_P001 | AT3G16120.1 | 21798944 |
| AT2G01190.1 | Zm00001d018530_P001 | AT5G08330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00348 | Sorghum | nucleus | 93.53 | 93.82 |
| Zm00001d039916_P010 | Maize | nucleus | 91.28 | 92.11 |
| Zm00001d003965_P001 | Maize | mitochondrion | 15.04 | 90.91 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 19.1 | 88.81 |
| Os01t0139200-01 | Rice | nucleus | 80.3 | 79.58 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 75.19 | 71.02 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 69.92 | 70.14 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 69.32 | 69.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.19 | 60.62 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 75.64 | 59.46 |
| GSMUA_Achr10P... | Banana | nucleus | 28.57 | 56.21 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 40.45 | 51.93 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 41.65 | 50.36 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 43.46 | 48.17 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 50.38 | 47.86 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 47.52 | 44.95 |
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.59 | 37.31 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 14.44 | 37.07 |
| VIT_01s0011g04140.t01 | Wine grape | nucleus | 38.05 | 36.3 |
| CDY24410 | Canola | cytosol | 13.98 | 36.05 |
| VIT_17s0000g03180.t01 | Wine grape | nucleus | 33.83 | 35.27 |
| KRH35888 | Soybean | nucleus | 35.94 | 33.8 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 13.68 | 33.46 |
| Solyc05g008830.2.1 | Tomato | nucleus | 32.33 | 33.44 |
| KRG90906 | Soybean | nucleus, plastid | 35.79 | 33.01 |
| CDY25942 | Canola | nucleus, plastid | 30.98 | 32.8 |
| PGSC0003DMT400015310 | Potato | nucleus | 32.33 | 32.63 |
| Bra017462.1-P | Field mustard | cytosol, plastid | 31.43 | 32.55 |
| KRH38173 | Soybean | nucleus | 31.88 | 32.52 |
| CDY41073 | Canola | nucleus, plastid | 30.83 | 32.49 |
| KRH48572 | Soybean | cytosol | 31.28 | 32.45 |
| Solyc03g118870.2.1 | Tomato | nucleus | 30.68 | 32.03 |
| KRH39133 | Soybean | cytosol | 32.18 | 31.99 |
| Solyc04g007460.2.1 | Tomato | plastid | 32.63 | 31.82 |
| PGSC0003DMT400014442 | Potato | nucleus | 32.03 | 31.09 |
| VIT_14s0006g02490.t01 | Wine grape | nucleus | 24.21 | 31.02 |
| CDY68695 | Canola | nucleus | 25.56 | 30.91 |
| Bra024899.1-P | Field mustard | nucleus, plastid | 33.53 | 30.72 |
| AT2G01190.1 | Thale cress | nucleus, plastid | 33.08 | 30.56 |
| CDY17690 | Canola | nucleus, plastid | 32.93 | 30.25 |
| Solyc02g086360.2.1 | Tomato | cytosol | 25.26 | 30.16 |
| Zm00001d006574_P001 | Maize | plastid | 16.99 | 30.13 |
| PGSC0003DMT400067817 | Potato | cytosol | 25.11 | 29.98 |
| Zm00001d021746_P001 | Maize | plastid | 17.14 | 29.77 |
| CDY40994 | Canola | cytosol | 25.11 | 29.3 |
| CDY24442 | Canola | cytosol | 25.11 | 29.25 |
| Zm00001d033571_P001 | Maize | cytosol | 7.07 | 29.01 |
| Bra022297.1-P | Field mustard | nucleus | 24.96 | 28.97 |
| CDX92217 | Canola | cytosol | 25.41 | 28.84 |
| Bra022296.1-P | Field mustard | cytosol | 25.56 | 28.72 |
| Bra037596.1-P | Field mustard | nucleus | 27.52 | 28.46 |
| Bra006344.1-P | Field mustard | plastid | 15.19 | 28.45 |
| CDY66514 | Canola | nucleus | 27.52 | 28.42 |
| AT3G18230.1 | Thale cress | nucleus, plastid | 28.27 | 28.23 |
| AT5G16220.1 | Thale cress | plastid | 19.55 | 27.31 |
| CDX70680 | Canola | plastid | 18.5 | 26.68 |
| CDX78676 | Canola | plastid | 17.74 | 26.28 |
| Bra008633.1-P | Field mustard | plastid | 19.1 | 26.19 |
| CDX69461 | Canola | plastid | 19.1 | 26.19 |
| Zm00001d033564_P001 | Maize | cytosol, plastid | 9.32 | 25.83 |
| Zm00001d049157_P001 | Maize | plastid | 8.27 | 24.12 |
| Zm00001d051939_P001 | Maize | cytosol | 15.64 | 19.33 |
| Zm00001d018447_P001 | Maize | extracellular | 15.79 | 19.16 |
| Zm00001d010214_P003 | Maize | cytosol | 10.83 | 18.37 |
Protein Annotations
| EMBL:BT054243 | EnsemblPlants:Zm00001d008591_P001 | EnsemblPlants:Zm00001d008591_T001 | EnsemblPlantsGene:Zm00001d008591 | EntrezGene:100279440 | Gene3D:3.10.20.90 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 |
| PANTHER:PTHR31066:SF27 | PFAM:PF00564 | ProteinID:AQK90217.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 |
| UniParc:UPI0001917432 | UniProt:B7ZY51 | MapMan:35.2 | : | : | : |
Description
Octicosapeptide/Phox/Bem1p family protein
Coordinates
chr8:-:13719470..13722383
Molecular Weight (calculated)
70401.0 Da
IEP (calculated)
6.173
GRAVY (calculated)
-0.539
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPLPSATAA GVGAPGPGPG YPESTESSPR SRGGDSWDEP FPSSAAAAAG GGGRLRLMCS FGGRIVPRPT DKSLCYLGGE TRIVAVDRHA SLADVHARLS
101: RSLLGGRPFT LKYQLPNEDL DSLISVSTDE DLDNLVDEYD RIAATSSGSG SSRTSRIRLF LFPATPESSS SLGSLLDDSS KSENWFVDAL NSAISGSLDG
201: IPRGISTDSA SVNCLLGLED DSSVHSRSGV TNSAPAEDQR ASQPKLPAGA TAVAAAAGAG RHPHDVQSVP DSPMLDKNSS FGSTSSAPSL SNLPPIRVRP
301: EDRPSDARIM QPTAVEDHFA QMGISEQQLP PYMQHQQQVP IPAMTGMSPS EASSRVFSDD DKSDHGGGGR KAQLLKQEVP AIVDPTNRAV YYNDRSPPAD
401: LKRDMPVGTE AASYRLPVSA PDAAAAAATQ VPAGYVLAQM HAPQQHPPPQ QHLPPQQPQQ PAPQQQIVSA GNQHFIHNPA TGTFIPIQSY YHHHPVPQQA
501: PQTVPRQQQA PAFDPNTGMY YLPMQQNAHQ PYSMPPGAQA TLPPPPPTLV DTAPKPTVPI PQMAVRPELQ QQPGVYRTTA AATPAPAPSA APPGYAGMAY
601: HHIIQSHHHP SPQPVSNMMA GNFGYEYADP TRPQVYYSQA AAAPPTLPPQ YQPIVSPDAG QAEKH
101: RSLLGGRPFT LKYQLPNEDL DSLISVSTDE DLDNLVDEYD RIAATSSGSG SSRTSRIRLF LFPATPESSS SLGSLLDDSS KSENWFVDAL NSAISGSLDG
201: IPRGISTDSA SVNCLLGLED DSSVHSRSGV TNSAPAEDQR ASQPKLPAGA TAVAAAAGAG RHPHDVQSVP DSPMLDKNSS FGSTSSAPSL SNLPPIRVRP
301: EDRPSDARIM QPTAVEDHFA QMGISEQQLP PYMQHQQQVP IPAMTGMSPS EASSRVFSDD DKSDHGGGGR KAQLLKQEVP AIVDPTNRAV YYNDRSPPAD
401: LKRDMPVGTE AASYRLPVSA PDAAAAAATQ VPAGYVLAQM HAPQQHPPPQ QHLPPQQPQQ PAPQQQIVSA GNQHFIHNPA TGTFIPIQSY YHHHPVPQQA
501: PQTVPRQQQA PAFDPNTGMY YLPMQQNAHQ PYSMPPGAQA TLPPPPPTLV DTAPKPTVPI PQMAVRPELQ QQPGVYRTTA AATPAPAPSA APPGYAGMAY
601: HHIIQSHHHP SPQPVSNMMA GNFGYEYADP TRPQVYYSQA AAAPPTLPPQ YQPIVSPDAG QAEKH
001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.