CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48572	Soybean	cytosol	87.59	91.42
Zm00001d003965_P001	Maize	mitochondrion	10.16	61.82
HORVU3Hr1G008310.1	Barley	cytosol	10.91	51.05
VIT_17s0000g03180.t01	Wine grape	nucleus	46.79	49.06
KRH57272	Soybean	cytosol	6.13	44.57
PGSC0003DMT400014442	Potato	nucleus	45.29	44.23
GSMUA_AchrUn_...	Banana	nucleus	25.41	44.04
KRH35888	Soybean	nucleus	45.14	42.72
Solyc03g118870.2.1	Tomato	nucleus	40.66	42.7
CDY40994	Canola	cytosol	36.02	42.28
CDY24442	Canola	cytosol	36.02	42.21
KRG90906	Soybean	nucleus, plastid	44.84	41.61
CDY68695	Canola	nucleus	34.08	41.45
Bra022297.1-P	Field mustard	nucleus	35.43	41.36
Bra037596.1-P	Field mustard	nucleus	39.31	40.9
CDY66514	Canola	nucleus	39.31	40.84
CDX92217	Canola	cytosol	35.58	40.61
Bra022296.1-P	Field mustard	cytosol	35.87	40.54
AT3G18230.1	Thale cress	nucleus, plastid	40.21	40.39
GSMUA_Achr10P...	Banana	nucleus	19.73	39.05
GSMUA_Achr8P18320_001	Banana	nucleus	30.19	39.0
KRH38173	Soybean	nucleus	37.97	38.96
GSMUA_Achr2P07240_001	Banana	nucleus	31.24	38.0
GSMUA_Achr1P21240_001	Banana	nucleus	29.9	33.33
Os01t0139200-01	Rice	nucleus	33.33	33.23
EES00348	Sorghum	nucleus	32.29	32.58
Zm00001d039916_P010	Maize	nucleus	31.84	32.32
Zm00001d008591_P001	Maize	mitochondrion	31.99	32.18
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	33.63	32.14
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	32.74	31.15
KRH29762	Soybean	plastid	5.53	31.09
KRH41951	Soybean	nucleus	19.28	30.64
TraesCS3A01G051800.1	Wheat	nucleus	32.14	30.54
TraesCS3D01G050900.1	Wheat	nucleus	30.04	30.32
KRH45586	Soybean	plastid	8.22	30.22
TraesCS3B01G060500.1	Wheat	cytosol	29.6	29.91
KRH03222	Soybean	cytosol	8.82	29.8
KRH54323	Soybean	cytosol, nucleus, plastid	8.22	29.57
KRH63619	Soybean	plastid	8.52	29.38
KRH69636	Soybean	plastid	9.27	29.25
KRH49930	Soybean	nucleus	18.39	29.01
KRH74522	Soybean	nucleus	9.72	28.14
KRH26304	Soybean	nucleus	10.61	27.2
KRH06059	Soybean	nucleus	10.61	26.49
KRH10652	Soybean	cytosol	17.34	26.01
KRH21700	Soybean	nucleus	17.04	25.91
KRH72507	Soybean	cytosol, nucleus, peroxisome	13.75	25.63
KRH49860	Soybean	nucleus	18.09	25.58
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	31.99	25.3
KRH42038	Soybean	cytosol	17.94	25.21
KRH16903	Soybean	nucleus	13.3	25.14

Protein Annotations

EntrezGene:100797907	Gene3D:3.10.20.90	MapMan:35.2	EMBL:ACUP02005920	EnsemblPlantsGene:GLYMA_09G180100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1L491	InterPro:IPR000270	EnsemblPlants:KRH39133	ProteinID:KRH39133
ProteinID:KRH39133.1	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS51745	PANTHER:PTHR31066	PANTHER:PTHR31066:SF27
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002338FD6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:40521085..40523895

Molecular Weight (calculated)

72259.8 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.397

Length

669 amino acids

Sequence
(BLAST)

001: MDPPPLSATT QKNHPDSVES FSPRSRNSET WNDETLPAVP GAKLRLMCSY GGHIMPRPHD KSLCYVGGDT RIVVVDRHSS LKDLCARLSR TILNGRPFTL
101: KYQLPNEDLD SLITVTTDED LDNMVEEYDR IMAKGSASSR LRLFLFFTKP EATVSMGSLL DDSKSETWFV DALNNSGMIS RVVSDSAAGD SFVNLDGVGV
201: GVGVGVSASG SSNNLEALPD ANNCKVKNLP EVVQVQSTPG SPMMENNSSS SPSFSPSLAN LPPIRVRVDD NGSRLHQENK VGMVVEEQFA QMTIASGVKP
301: DDGLVNVVSS TVPVPVIPAA VTMASVGVIT TSDNVMNRVV YEDERSDPGF RKPPLPMQLV QPRTSGGVGL PSPDSVASDS SIASANSFSK TVYYQDQVQA
401: TLLDNKVVAA MPNAKSEISD QMIQVQGQLQ DSGYTLPPQL DQTKQQFQQQ QPLIHANNHY IHHPAATGPV PVSSYYPVYA PPPQLQQLHP HISQQQYPVY
501: VMPVGPTQVT QPYNMALQHN ISDPNVVASS RPLMPQSVVT SAAYKDGTPP IYSTKSLSPT MAPSNPGYAP IPTNQFQPQY VGLSQFHHQP QSIAVAPSST
601: TTTTTNYGYE YGGHVQDQAY YTQQQTTNAT LLPQYQSMTP AAAAAALSDA SKQFPADNIQ QPNRASQPV

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.