CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29762	Soybean	plastid	34.62	52.94
KRH69636	Soybean	plastid	56.04	48.11
KRH74522	Soybean	nucleus	57.14	45.02
GSMUA_Achr3P19440_001	Banana	plastid	38.46	43.48
AT1G70640.1	Thale cress	cytosol	40.66	42.53
GSMUA_Achr10P...	Banana	cytosol	45.6	40.29
KRH54323	Soybean	cytosol, nucleus, plastid	40.66	39.78
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	46.7	38.99
GSMUA_Achr8P16400_001	Banana	plastid	42.31	38.12
KRH63619	Soybean	plastid	39.56	37.11
Os11t0444900-01	Rice	cytosol, plastid	43.96	37.04
TraesCS6B01G245800.1	Wheat	plastid	40.11	36.87
KRH03222	Soybean	cytosol	39.56	36.36
TraesCS6A01G217000.1	Wheat	plastid	40.11	36.32
TraesCS6D01G198500.1	Wheat	plastid	39.56	36.0
KRH57272	Soybean	cytosol	18.13	35.87
Os11t0444700-01	Rice	cytosol	41.76	33.93
EES09698	Sorghum	cytosol	43.41	33.47
GSMUA_Achr6P06660_001	Banana	plastid	42.31	31.82
Zm00001d049157_P001	Maize	plastid	39.01	31.14
HORVU6Hr1G055230.3	Barley	cytosol	39.56	30.9
KRH26304	Soybean	nucleus	32.97	22.99
KRH06059	Soybean	nucleus	33.52	22.76
KRH41951	Soybean	nucleus	29.67	12.83
KRH49930	Soybean	nucleus	29.12	12.5
KRH21700	Soybean	nucleus	30.22	12.5
KRH42038	Soybean	cytosol	31.32	11.97
KRH10652	Soybean	cytosol	29.12	11.88
KRH16903	Soybean	nucleus	22.53	11.58
KRH72507	Soybean	cytosol, nucleus, peroxisome	22.53	11.42
KRH49860	Soybean	nucleus	29.67	11.42
KRH38173	Soybean	nucleus	30.77	8.59
KRH48572	Soybean	cytosol	30.22	8.58
KRH39133	Soybean	cytosol	30.22	8.22
KRH35888	Soybean	nucleus	29.67	7.64
KRG90906	Soybean	nucleus, plastid	29.12	7.35

Protein Annotations

EMBL:ACUP02005268	EnsemblPlants:KRH45586	EnsemblPlantsGene:GLYMA_08G282000	EntrezGene:100786933	Gene3D:3.10.20.90	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1
PFAM:PF00564	ProteinID:ARW71733.1	ProteinID:ARW71734.1	ProteinID:KRH45586	ProteinID:KRH45586.1	SEG:seg
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI00023383C6	UniProt:K7L9F8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:-:38696279..38698329

Molecular Weight (calculated)

19651.3 Da

IEP (calculated)

8.571

GRAVY (calculated)

-0.246

Length

182 amino acids

Sequence
(BLAST)

001: MVGPSPSHGN NLKFLCSYGG KILPRFPDSK LRYFGGHTRV LALPRSAPFS EVMVKLEELC GAHVTHLRCQ LPTEDLDALV SITCDEDLNN LVEEYDGAVS
101: SLKIRAFLCS SPAPSKSSST TSSSCSSSSS SPSSCCRTAM AAPPQLAKKS YVSLSSPRYY SHPRVQGNRG VVYLVPSGNH WH

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.