CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72507	Soybean	cytosol, nucleus, peroxisome	86.72	85.52
KRH57272	Soybean	cytosol	16.67	64.13
KRH29762	Soybean	plastid	10.73	31.93
KRH21700	Soybean	nucleus	36.44	29.32
KRH49860	Soybean	nucleus	38.98	29.18
KRH10652	Soybean	cytosol	36.44	28.92
KRH42038	Soybean	cytosol	38.7	28.78
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	31.36	26.81
KRH63619	Soybean	plastid	14.69	26.8
KRH54323	Soybean	cytosol, nucleus, plastid	13.84	26.34
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	20.9	24.92
KRH03222	Soybean	cytosol	13.56	24.24
KRH69636	Soybean	plastid	13.84	23.11
KRH26304	Soybean	nucleus	16.95	22.99
KRH45586	Soybean	plastid	11.58	22.53
TraesCS6A01G380500.1	Wheat	cytosol	33.33	22.18
KRH06059	Soybean	nucleus	16.67	22.01
Zm00001d051939_P001	Maize	cytosol	33.05	21.75
KRH74522	Soybean	nucleus	14.12	21.64
GSMUA_Achr1P05710_001	Banana	cytosol	29.66	21.56
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	33.33	21.42
TraesCS6B01G419500.1	Wheat	cytosol	28.81	20.69
TraesCS6D01G365200.1	Wheat	cytosol	28.53	20.65
EES07730	Sorghum	cytosol	32.77	20.49
Zm00001d018447_P001	Maize	extracellular	31.64	20.44
KRH41951	Soybean	nucleus	24.29	20.43
KRH49930	Soybean	nucleus	24.29	20.28
KRH48572	Soybean	cytosol	24.29	13.42
KRH39133	Soybean	cytosol	25.14	13.3
KRH35888	Soybean	nucleus	26.55	13.3
KRG90906	Soybean	nucleus, plastid	25.99	12.76
KRH38173	Soybean	nucleus	21.75	11.81

Protein Annotations

EMBL:ACUP02009025	EnsemblPlants:KRH16903	EnsemblPlantsGene:GLYMA_14G184700	EntrezGene:100792391	Gene3D:3.10.20.90	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	ncoils:Coil	PANTHER:PTHR31066
PANTHER:PTHR31066:SF5	PFAM:PF00564	ProteinID:KRH16903	ProteinID:KRH16903.1	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	UniParc:UPI000233C0CD	UniProt:I1MB27	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr14:-:44810185..44811249

Molecular Weight (calculated)

39042.3 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.685

Length

354 amino acids

Sequence
(BLAST)

001: MDSRDSSPCS RDPDAADNHH HHRRPSFDDA PPKVKLMCSF GGRIQPRPHD NHLTYVAGDT KILSVDRHVK FPSLIAKLSS LANNALSNHS FFKYQLPGED
101: LDALISVTND DDLHHMMIEY DRLSRSSSRP ARLRLFLFPL HNNNNNNFAP TELKSERQWF VDALNSVHVP EDSPAPPPTA NPDFLFGLEK PPAEDAPAKD
201: SECFPEDREA EPEIQNENNN EQRKMKTEED NDNGRVYGVN GGDCFVQKNA EKVTPLVAHS HAHAHAQFVH PGSVTGTGTG TVSFMQERNN NAGYSLAVPT
301: TGNEIYLIHT PSGMFQAVRP MTGPVGQPVY LVHAPGPVSH SELGAAVGRG GARW

Best Arabidopsis Sequence Match ( AT5G09620.1 )
(BLAST)

001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAIHQNQLH HQQEVIHQNQ LLQQEAIHQN
301: QMLQQQQQQE AMYRRKTEDE AGRYFPPTYT QNPAPVTNQQ PPVGYWQGNT NNSNIQGNIY TTTSQNLPEQ QQQQQQVYMI PAQSQAPGTL YQSVMRPTVQ
401: GNQGYYPSPV QRLHHPDAYM EQQNQPGYNV VQPQPTFSGG PQVMTSVGPQ VMTSVGPPMG LQEPYSQMGK PVYYTVAGEG MMVQPPPAQP QQQQQQYQGM
501: GQPVSGMTDL RTGPDGKVAV NMAAPQVSDS V

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.