Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06059 | Soybean | nucleus | 81.61 | 79.48 |
| CDY21444 | Canola | mitochondrion | 44.06 | 43.56 |
| Bra000599.1-P | Field mustard | mitochondrion | 43.3 | 42.64 |
| CDX83177 | Canola | mitochondrion | 43.3 | 42.48 |
| AT5G49920.1 | Thale cress | nucleus | 45.98 | 41.67 |
| CDX91540 | Canola | nucleus | 42.53 | 39.36 |
| CDY16375 | Canola | nucleus | 42.15 | 39.01 |
| Bra022508.1-P | Field mustard | nucleus | 42.15 | 39.01 |
| KRH57272 | Soybean | cytosol | 13.03 | 36.96 |
| KRH29762 | Soybean | plastid | 16.48 | 36.13 |
| PGSC0003DMT400097584 | Potato | nucleus | 47.89 | 33.97 |
| KRH45586 | Soybean | plastid | 22.99 | 32.97 |
| KRH54323 | Soybean | cytosol, nucleus, plastid | 22.61 | 31.72 |
| KRH63619 | Soybean | plastid | 22.61 | 30.41 |
| KRH69636 | Soybean | plastid | 24.14 | 29.72 |
| VIT_12s0035g01050.t01 | Wine grape | extracellular, golgi | 43.3 | 29.2 |
| GSMUA_Achr3P21900_001 | Banana | nucleus | 39.46 | 27.99 |
| GSMUA_Achr11P... | Banana | plastid | 31.8 | 27.04 |
| KRH74522 | Soybean | nucleus | 23.75 | 26.84 |
| KRH03222 | Soybean | cytosol | 20.31 | 26.77 |
| TraesCS1A01G266900.1 | Wheat | nucleus | 32.18 | 23.01 |
| TraesCS1D01G267100.1 | Wheat | nucleus | 32.18 | 22.95 |
| Os05t0427100-01 | Rice | cytosol | 32.18 | 22.95 |
| OQU78054 | Sorghum | cytosol | 31.42 | 22.4 |
| Zm00001d010214_P003 | Maize | cytosol | 31.42 | 20.92 |
| TraesCS1B01G277800.1 | Wheat | cytosol, mitochondrion | 32.18 | 20.69 |
| HORVU1Hr1G065470.6 | Barley | mitochondrion | 31.8 | 19.12 |
| KRH16903 | Soybean | nucleus | 22.99 | 16.95 |
| KRH41951 | Soybean | nucleus | 26.82 | 16.63 |
| KRH49930 | Soybean | nucleus | 26.44 | 16.27 |
| KRH72507 | Soybean | cytosol, nucleus, peroxisome | 22.22 | 16.16 |
| KRH21700 | Soybean | nucleus | 24.9 | 14.77 |
| KRH10652 | Soybean | cytosol | 24.9 | 14.57 |
| KRH42038 | Soybean | cytosol | 24.52 | 13.45 |
| KRH49860 | Soybean | nucleus | 23.37 | 12.9 |
| KRH38173 | Soybean | nucleus | 29.5 | 11.81 |
| KRH48572 | Soybean | cytosol | 26.82 | 10.92 |
| KRH39133 | Soybean | cytosol | 27.2 | 10.61 |
| KRH35888 | Soybean | nucleus | 27.59 | 10.18 |
| KRG90906 | Soybean | nucleus, plastid | 27.97 | 10.12 |
Protein Annotations
| EntrezGene:100799918 | Gene3D:3.10.20.90 | MapMan:35.2 | EMBL:ACUP02007706 | EnsemblPlantsGene:GLYMA_12G166300 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1LTB7 | InterPro:IPR000270 | EnsemblPlants:KRH26304 | ProteinID:KRH26304 |
| ProteinID:KRH26304.1 | InterPro:PB1_dom | PFAM:PF00564 | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF13 | SMART:SM00666 |
| SUPFAM:SSF54277 | UniParc:UPI000233D197 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:32066157..32067676
Molecular Weight (calculated)
29361.7 Da
IEP (calculated)
8.839
GRAVY (calculated)
-0.725
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDESPRNKV KFLCSYGGKV LPRPSDGLLR YVGGETRVVS VPRDITFPEL MKKVSSMVEG GGEMVLKYQL VPEDLDALVS VRTEEDVKHM MEEHDRHHTG
101: GLLRAFLFPP CKHIGLMACE TYLLEQRYID AINGIIRTSS RKGSACSSPK SNSPDATDQH SPRFSISRVQ SSPNLSGLDH HHQHHHHQNP NFHLSKPPQD
201: PQMGMRLGGG RAPTPAFNHH YSRQPPYRAY AYYDDSAAAS YAHDNRIHTV SRSPRTKSIW E
101: GLLRAFLFPP CKHIGLMACE TYLLEQRYID AINGIIRTSS RKGSACSSPK SNSPDATDQH SPRFSISRVQ SSPNLSGLDH HHQHHHHQNP NFHLSKPPQD
201: PQMGMRLGGG RAPTPAFNHH YSRQPPYRAY AYYDDSAAAS YAHDNRIHTV SRSPRTKSIW E
001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
Arabidopsis Description
At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.