Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000599.1-P | Field mustard | mitochondrion | 98.5 | 98.87 |
| CDY21444 | Canola | mitochondrion | 94.36 | 95.08 |
| CDY16375 | Canola | nucleus | 81.2 | 76.6 |
| CDX91540 | Canola | nucleus | 80.45 | 75.89 |
| AT5G49920.1 | Thale cress | nucleus | 75.94 | 70.14 |
| KRH26304 | Soybean | nucleus | 42.48 | 43.3 |
| KRH06059 | Soybean | nucleus | 43.23 | 42.91 |
| CDY66304 | Canola | cytosol | 22.18 | 35.54 |
| CDY61217 | Canola | cytosol, mitochondrion | 21.8 | 34.94 |
| CDY48987 | Canola | plastid | 23.31 | 34.64 |
| CDY28543 | Canola | plastid | 22.56 | 34.09 |
| CDX83621 | Canola | mitochondrion | 22.93 | 33.7 |
| PGSC0003DMT400097584 | Potato | nucleus | 45.86 | 33.15 |
| CDY13638 | Canola | mitochondrion | 22.56 | 33.15 |
| CDY72321 | Canola | plastid | 21.05 | 31.28 |
| VIT_12s0035g01050.t01 | Wine grape | extracellular, golgi | 45.11 | 31.01 |
| CDY39571 | Canola | plastid | 21.05 | 30.6 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 21.8 | 30.37 |
| CDY41501 | Canola | cytosol | 21.43 | 30.16 |
| CDY48161 | Canola | plastid | 20.68 | 30.05 |
| CDY20093 | Canola | extracellular, plasma membrane | 21.8 | 29.9 |
| CDX84387 | Canola | nucleus | 21.05 | 28.57 |
| GSMUA_Achr11P... | Banana | plastid | 29.7 | 25.73 |
| GSMUA_Achr3P21900_001 | Banana | nucleus | 34.21 | 24.73 |
| TraesCS1A01G266900.1 | Wheat | nucleus | 31.95 | 23.29 |
| TraesCS1D01G267100.1 | Wheat | nucleus | 31.95 | 23.22 |
| Os05t0427100-01 | Rice | cytosol | 31.2 | 22.68 |
| CDY31319 | Canola | nucleus | 23.68 | 22.58 |
| OQU78054 | Sorghum | cytosol | 30.83 | 22.4 |
| Zm00001d010214_P003 | Maize | cytosol | 31.2 | 21.17 |
| TraesCS1B01G277800.1 | Wheat | cytosol, mitochondrion | 31.95 | 20.94 |
| HORVU1Hr1G065470.6 | Barley | mitochondrion | 31.95 | 19.59 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 18.8 | 19.3 |
| CDY24410 | Canola | cytosol | 18.42 | 18.99 |
| CDY46377 | Canola | nucleus | 23.31 | 15.66 |
| CDY62874 | Canola | nucleus | 23.31 | 15.62 |
| CDX84525 | Canola | nucleus | 28.2 | 15.46 |
| CDY58263 | Canola | nucleus | 27.82 | 15.45 |
| CDY46804 | Canola | nucleus | 26.69 | 14.92 |
| CDX97304 | Canola | nucleus | 24.81 | 14.86 |
| CDX91230 | Canola | nucleus | 24.44 | 14.71 |
| CDX69896 | Canola | nucleus | 24.44 | 13.83 |
| CDY21590 | Canola | nucleus | 24.44 | 13.68 |
| CDX78676 | Canola | plastid | 19.92 | 11.8 |
| CDY40994 | Canola | cytosol | 24.81 | 11.58 |
| CDY24442 | Canola | cytosol | 24.81 | 11.56 |
| CDX70680 | Canola | plastid | 19.92 | 11.5 |
| CDY68695 | Canola | nucleus | 23.31 | 11.27 |
| CDX92217 | Canola | cytosol | 24.44 | 11.09 |
| CDX69461 | Canola | plastid | 19.92 | 10.93 |
| CDY25942 | Canola | nucleus, plastid | 23.68 | 10.03 |
| CDY66514 | Canola | nucleus | 23.68 | 9.78 |
| CDY41073 | Canola | nucleus, plastid | 22.56 | 9.51 |
| CDY17690 | Canola | nucleus, plastid | 24.44 | 8.98 |
Protein Annotations
| EnsemblPlants:CDX83177 | EnsemblPlantsGene:GSBRNA2T00138707001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF13 | PFAM:PF00564 | ProteinID:CDX83177 |
| ProteinID:CDX83177.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EE58FF | MapMan:35.2 |
Description
BnaA03g23290D
Coordinates
chrLK031832:+:233511..234615
Molecular Weight (calculated)
30135.8 Da
IEP (calculated)
9.418
GRAVY (calculated)
-0.769
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIGGRSKVK FMCSFGGKIL PRPSDGLLKY VGGETRVIAV SPDITFLELT KKLTEMTEND MVLKYQIIPE DLDALVSVKS DEDLKHMMDE YNRHQETPKL
101: RTFLFPAVQL GSPMEPQTIE QRYIEAINGI VRKIKTRPSF TLSASSSPKS ESSPDGYGNE QPEMGSSYQL SRLYPMHRVR SSPNISQQQH NYHHHHHHHS
201: AYFQQPNYLT CRLRPPPPPP LDFPRGAGWG DPQGGGNGKY GCSEERRFWG RASSVPQSPR NHGFRL
101: RTFLFPAVQL GSPMEPQTIE QRYIEAINGI VRKIKTRPSF TLSASSSPKS ESSPDGYGNE QPEMGSSYQL SRLYPMHRVR SSPNISQQQH NYHHHHHHHS
201: AYFQQPNYLT CRLRPPPPPP LDFPRGAGWG DPQGGGNGKY GCSEERRFWG RASSVPQSPR NHGFRL
001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL
Arabidopsis Description
At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.