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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66304 Canola cytosol 96.39 96.39
Bra016197.1-P Field mustard mitochondrion 93.98 93.98
CDY20093 Canola extracellular, plasma membrane 94.58 80.93
AT1G70640.1 Thale cress cytosol 71.08 67.82
CDX83621 Canola mitochondrion 54.82 50.28
CDY48987 Canola plastid 53.61 49.72
CDY28543 Canola plastid 51.81 48.86
CDY13638 Canola mitochondrion 51.81 47.51
GSMUA_Achr3P19440_001 Banana plastid 42.17 43.48
CDY39571 Canola plastid 42.77 38.8
CDY48161 Canola plastid 42.77 38.8
CDY41501 Canola cytosol 43.98 38.62
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 50.0 38.07
CDY72321 Canola plastid 40.96 37.99
CDX84387 Canola nucleus 43.98 37.24
CDY48129 Canola cytosol, nucleus, plastid 42.17 36.65
GSMUA_Achr10P... Banana cytosol 45.18 36.41
GSMUA_Achr8P16400_001 Banana plastid 43.37 35.64
TraesCS6B01G245800.1 Wheat plastid 40.96 34.34
TraesCS6A01G217000.1 Wheat plastid 40.96 33.83
TraesCS6D01G198500.1 Wheat plastid 40.36 33.5
Os11t0444900-01 Rice cytosol, plastid 42.77 32.87
Os11t0444700-01 Rice cytosol 43.98 32.59
GSMUA_Achr6P06660_001 Banana plastid 45.18 30.99
EES09698 Sorghum cytosol 43.98 30.93
HORVU6Hr1G055230.3 Barley cytosol 40.96 29.18
Zm00001d049157_P001 Maize plastid 39.76 28.95
CDX83177 Canola mitochondrion 34.94 21.8
CDY21444 Canola mitochondrion 34.34 21.59
CDX91540 Canola nucleus 36.14 21.28
CDY16375 Canola nucleus 36.14 21.28
CDY36115 Canola cytosol, nucleus, vacuole 29.52 18.92
CDY24410 Canola cytosol 27.71 17.83
CDY31319 Canola nucleus 27.71 16.49
CDY46377 Canola nucleus 33.13 13.89
CDY62874 Canola nucleus 32.53 13.6
CDX97304 Canola nucleus 33.13 12.39
CDX91230 Canola nucleus 32.53 12.22
CDY58263 Canola nucleus 31.93 11.06
CDX69896 Canola nucleus 31.33 11.06
CDY21590 Canola nucleus 31.33 10.95
CDX84525 Canola nucleus 30.72 10.52
CDY46804 Canola nucleus 29.52 10.29
CDY68695 Canola nucleus 30.72 9.27
CDX78676 Canola plastid 24.7 9.13
CDX70680 Canola plastid 24.7 8.89
CDY40994 Canola cytosol 30.12 8.77
CDY24442 Canola cytosol 30.12 8.76
CDX92217 Canola cytosol 30.12 8.53
CDX69461 Canola plastid 24.1 8.25
CDY66514 Canola nucleus 31.33 8.07
CDY25942 Canola nucleus, plastid 29.52 7.8
CDY41073 Canola nucleus, plastid 27.71 7.29
CDY17690 Canola nucleus, plastid 31.33 7.18
Protein Annotations
EnsemblPlants:CDY61217EnsemblPlantsGene:GSBRNA2T00030723001Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000270InterPro:PB1_domPANTHER:PTHR31066PANTHER:PTHR31066:SF1PFAM:PF00564ProteinID:CDY61217
ProteinID:CDY61217.1SEG:segSMART:SM00666SUPFAM:SSF54277UniParc:UPI0004EDE4E6UniProt:A0A078J8N7
MapMan:35.2:::::
Description
BnaC06g43650DBnaC06g43650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8N7]
Coordinates
chrLK033970:-:7303..8038
Molecular Weight (calculated)
18197.7 Da
IEP (calculated)
8.879
GRAVY (calculated)
-0.301
Length
166 amino acids
Sequence
(BLAST)
001: MATVKFLCSY GGRIIPRYPD NKLRYHGGHT RVLSVQRSIS FAELAVKLGE VCGMKVSSLR CQLPADDLDG LVTVSSDEDL ANLMEEYDLA ATALKIRVFL
101: SPPLSTMSSS SSSNSSTSRS CSPSSPSTVS PKTCPVCVER SHHRNTNKGC YVQRSPSRDQ FYLVRN
Best Arabidopsis Sequence Match ( AT1G70640.1 )
(BLAST)
001: MVPNTTTVKF LCSYGGRITP RYPDGKLRYQ GGDTRVLSVT RAISFTELKK KLGEICGIAV TSLRCQLPTD DLDALVTVRS DEDLKNLMEE YDLAITAQVK
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
Arabidopsis Description
At1g70640 [Source:UniProtKB/TrEMBL;Acc:Q9S843]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.