Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY66304 | Canola | cytosol | 96.39 | 96.39 |
Bra016197.1-P | Field mustard | mitochondrion | 93.98 | 93.98 |
CDY20093 | Canola | extracellular, plasma membrane | 94.58 | 80.93 |
AT1G70640.1 | Thale cress | cytosol | 71.08 | 67.82 |
CDX83621 | Canola | mitochondrion | 54.82 | 50.28 |
CDY48987 | Canola | plastid | 53.61 | 49.72 |
CDY28543 | Canola | plastid | 51.81 | 48.86 |
CDY13638 | Canola | mitochondrion | 51.81 | 47.51 |
GSMUA_Achr3P19440_001 | Banana | plastid | 42.17 | 43.48 |
CDY39571 | Canola | plastid | 42.77 | 38.8 |
CDY48161 | Canola | plastid | 42.77 | 38.8 |
CDY41501 | Canola | cytosol | 43.98 | 38.62 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 50.0 | 38.07 |
CDY72321 | Canola | plastid | 40.96 | 37.99 |
CDX84387 | Canola | nucleus | 43.98 | 37.24 |
CDY48129 | Canola | cytosol, nucleus, plastid | 42.17 | 36.65 |
GSMUA_Achr10P... | Banana | cytosol | 45.18 | 36.41 |
GSMUA_Achr8P16400_001 | Banana | plastid | 43.37 | 35.64 |
TraesCS6B01G245800.1 | Wheat | plastid | 40.96 | 34.34 |
TraesCS6A01G217000.1 | Wheat | plastid | 40.96 | 33.83 |
TraesCS6D01G198500.1 | Wheat | plastid | 40.36 | 33.5 |
Os11t0444900-01 | Rice | cytosol, plastid | 42.77 | 32.87 |
Os11t0444700-01 | Rice | cytosol | 43.98 | 32.59 |
GSMUA_Achr6P06660_001 | Banana | plastid | 45.18 | 30.99 |
EES09698 | Sorghum | cytosol | 43.98 | 30.93 |
HORVU6Hr1G055230.3 | Barley | cytosol | 40.96 | 29.18 |
Zm00001d049157_P001 | Maize | plastid | 39.76 | 28.95 |
CDX83177 | Canola | mitochondrion | 34.94 | 21.8 |
CDY21444 | Canola | mitochondrion | 34.34 | 21.59 |
CDX91540 | Canola | nucleus | 36.14 | 21.28 |
CDY16375 | Canola | nucleus | 36.14 | 21.28 |
CDY36115 | Canola | cytosol, nucleus, vacuole | 29.52 | 18.92 |
CDY24410 | Canola | cytosol | 27.71 | 17.83 |
CDY31319 | Canola | nucleus | 27.71 | 16.49 |
CDY46377 | Canola | nucleus | 33.13 | 13.89 |
CDY62874 | Canola | nucleus | 32.53 | 13.6 |
CDX97304 | Canola | nucleus | 33.13 | 12.39 |
CDX91230 | Canola | nucleus | 32.53 | 12.22 |
CDY58263 | Canola | nucleus | 31.93 | 11.06 |
CDX69896 | Canola | nucleus | 31.33 | 11.06 |
CDY21590 | Canola | nucleus | 31.33 | 10.95 |
CDX84525 | Canola | nucleus | 30.72 | 10.52 |
CDY46804 | Canola | nucleus | 29.52 | 10.29 |
CDY68695 | Canola | nucleus | 30.72 | 9.27 |
CDX78676 | Canola | plastid | 24.7 | 9.13 |
CDX70680 | Canola | plastid | 24.7 | 8.89 |
CDY40994 | Canola | cytosol | 30.12 | 8.77 |
CDY24442 | Canola | cytosol | 30.12 | 8.76 |
CDX92217 | Canola | cytosol | 30.12 | 8.53 |
CDX69461 | Canola | plastid | 24.1 | 8.25 |
CDY66514 | Canola | nucleus | 31.33 | 8.07 |
CDY25942 | Canola | nucleus, plastid | 29.52 | 7.8 |
CDY41073 | Canola | nucleus, plastid | 27.71 | 7.29 |
CDY17690 | Canola | nucleus, plastid | 31.33 | 7.18 |
Protein Annotations
EnsemblPlants:CDY61217 | EnsemblPlantsGene:GSBRNA2T00030723001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF1 | PFAM:PF00564 | ProteinID:CDY61217 |
ProteinID:CDY61217.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EDE4E6 | UniProt:A0A078J8N7 |
MapMan:35.2 | : | : | : | : | : |
Description
BnaC06g43650DBnaC06g43650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8N7]
Coordinates
chrLK033970:-:7303..8038
Molecular Weight (calculated)
18197.7 Da
IEP (calculated)
8.879
GRAVY (calculated)
-0.301
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVKFLCSY GGRIIPRYPD NKLRYHGGHT RVLSVQRSIS FAELAVKLGE VCGMKVSSLR CQLPADDLDG LVTVSSDEDL ANLMEEYDLA ATALKIRVFL
101: SPPLSTMSSS SSSNSSTSRS CSPSSPSTVS PKTCPVCVER SHHRNTNKGC YVQRSPSRDQ FYLVRN
101: SPPLSTMSSS SSSNSSTSRS CSPSSPSTVS PKTCPVCVER SHHRNTNKGC YVQRSPSRDQ FYLVRN
001: MVPNTTTVKF LCSYGGRITP RYPDGKLRYQ GGDTRVLSVT RAISFTELKK KLGEICGIAV TSLRCQLPTD DLDALVTVRS DEDLKNLMEE YDLAITAQVK
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
Arabidopsis Description
At1g70640 [Source:UniProtKB/TrEMBL;Acc:Q9S843]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.