Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66304 | Canola | cytosol | 83.51 | 97.59 |
| Bra016197.1-P | Field mustard | mitochondrion | 81.44 | 95.18 |
| CDY61217 | Canola | cytosol, mitochondrion | 80.93 | 94.58 |
| AT1G70640.1 | Thale cress | cytosol | 61.34 | 68.39 |
| CDX83621 | Canola | mitochondrion | 47.42 | 50.83 |
| CDY48987 | Canola | plastid | 46.39 | 50.28 |
| CDY28543 | Canola | plastid | 44.85 | 49.43 |
| CDY13638 | Canola | mitochondrion | 44.85 | 48.07 |
| GSMUA_Achr3P19440_001 | Banana | plastid | 36.6 | 44.1 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 43.81 | 38.99 |
| CDY39571 | Canola | plastid | 36.6 | 38.8 |
| CDY48161 | Canola | plastid | 36.6 | 38.8 |
| CDY41501 | Canola | cytosol | 37.63 | 38.62 |
| CDY72321 | Canola | plastid | 35.05 | 37.99 |
| CDX84387 | Canola | nucleus | 37.63 | 37.24 |
| GSMUA_Achr10P... | Banana | cytosol | 39.18 | 36.89 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 36.08 | 36.65 |
| GSMUA_Achr8P16400_001 | Banana | plastid | 37.63 | 36.14 |
| TraesCS6B01G245800.1 | Wheat | plastid | 35.57 | 34.85 |
| TraesCS6A01G217000.1 | Wheat | plastid | 35.57 | 34.33 |
| TraesCS6D01G198500.1 | Wheat | plastid | 35.05 | 34.0 |
| Os11t0444900-01 | Rice | cytosol, plastid | 37.11 | 33.33 |
| Os11t0444700-01 | Rice | cytosol | 37.63 | 32.59 |
| GSMUA_Achr6P06660_001 | Banana | plastid | 39.18 | 31.41 |
| EES09698 | Sorghum | cytosol | 38.14 | 31.36 |
| HORVU6Hr1G055230.3 | Barley | cytosol | 35.57 | 29.61 |
| Zm00001d049157_P001 | Maize | plastid | 34.54 | 29.39 |
| CDX83177 | Canola | mitochondrion | 29.9 | 21.8 |
| CDY21444 | Canola | mitochondrion | 29.38 | 21.59 |
| CDX91540 | Canola | nucleus | 30.93 | 21.28 |
| CDY16375 | Canola | nucleus | 30.93 | 21.28 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 25.26 | 18.92 |
| CDY24410 | Canola | cytosol | 23.71 | 17.83 |
| CDY31319 | Canola | nucleus | 23.71 | 16.49 |
| CDY46377 | Canola | nucleus | 28.35 | 13.89 |
| CDY62874 | Canola | nucleus | 27.84 | 13.6 |
| CDX97304 | Canola | nucleus | 28.87 | 12.61 |
| CDX91230 | Canola | nucleus | 28.35 | 12.44 |
| CDX69896 | Canola | nucleus | 27.32 | 11.28 |
| CDY21590 | Canola | nucleus | 27.32 | 11.16 |
| CDY58263 | Canola | nucleus | 27.32 | 11.06 |
| CDX84525 | Canola | nucleus | 26.29 | 10.52 |
| CDY46804 | Canola | nucleus | 25.26 | 10.29 |
| CDX78676 | Canola | plastid | 21.13 | 9.13 |
| CDY68695 | Canola | nucleus | 25.77 | 9.09 |
| CDX70680 | Canola | plastid | 21.13 | 8.89 |
| CDY40994 | Canola | cytosol | 25.77 | 8.77 |
| CDY24442 | Canola | cytosol | 25.77 | 8.76 |
| CDX92217 | Canola | cytosol | 25.77 | 8.53 |
| CDX69461 | Canola | plastid | 20.62 | 8.25 |
| CDY66514 | Canola | nucleus | 26.29 | 7.92 |
| CDY25942 | Canola | nucleus, plastid | 25.26 | 7.8 |
| CDY41073 | Canola | nucleus, plastid | 23.71 | 7.29 |
| CDY17690 | Canola | nucleus, plastid | 26.8 | 7.18 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.2 | GO:A0A078G635 | UniProt:A0A078G635 | EnsemblPlants:CDY20093 | ProteinID:CDY20093 |
| ProteinID:CDY20093.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00009944001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF00564 | PANTHER:PTHR31066 |
| PANTHER:PTHR31066:SF1 | SMART:SM00666 | SUPFAM:SSF54277 | TMHMM:TMhelix | UniParc:UPI0004EF29A3 | SEG:seg |
Description
BnaA01g29090DBnaA01g29090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G635]
Coordinates
chrLK032103:-:122511..123445
Molecular Weight (calculated)
21948.4 Da
IEP (calculated)
8.807
GRAVY (calculated)
0.025
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEKFLITRV SNMCFCFFFF FFFFFFFFFP LLFSLCSYGG RIIPRYPDNK LRYHGGHTRV LSVKRSISFA ELAVKLGEVC GMKVISLRCQ LPTDDLDALV
101: TVSSDEDLAN LMEEYDLAAT ALKIRVFLSP PLSTTSSSSS SNSSTSRSCS PSSPSTVSPK TCPVCVERSH HRNTNKGCYV QRSPSRDQFY LVRN
101: TVSSDEDLAN LMEEYDLAAT ALKIRVFLSP PLSTTSSSSS SNSSTSRSCS PSSPSTVSPK TCPVCVERSH HRNTNKGCYV QRSPSRDQFY LVRN
001: MVPNTTTVKF LCSYGGRITP RYPDGKLRYQ GGDTRVLSVT RAISFTELKK KLGEICGIAV TSLRCQLPTD DLDALVTVRS DEDLKNLMEE YDLAITAQVK
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
Arabidopsis Description
At1g70640 [Source:UniProtKB/TrEMBL;Acc:Q9S843]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.