Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032936.1-P | Field mustard | plastid | 96.02 | 94.41 |
| CDY48987 | Canola | plastid | 95.45 | 93.85 |
| CDX83621 | Canola | mitochondrion | 90.34 | 87.85 |
| CDY13638 | Canola | mitochondrion | 88.07 | 85.64 |
| VIT_00s0291g00050.t01 | Wine grape | plastid | 61.93 | 55.9 |
| CDY66304 | Canola | cytosol | 50.0 | 53.01 |
| CDY61217 | Canola | cytosol, mitochondrion | 48.86 | 51.81 |
| KRH29762 | Soybean | plastid | 34.66 | 51.26 |
| GSMUA_Achr3P19440_001 | Banana | plastid | 42.61 | 46.58 |
| KRH69636 | Soybean | plastid | 55.11 | 45.75 |
| CDY20093 | Canola | extracellular, plasma membrane | 49.43 | 44.85 |
| KRH74522 | Soybean | nucleus | 56.82 | 43.29 |
| PGSC0003DMT400047888 | Potato | cytosol, mitochondrion, plastid | 56.25 | 42.13 |
| GSMUA_Achr10P... | Banana | cytosol | 48.86 | 41.75 |
| Solyc05g013530.2.1 | Tomato | plastid | 51.14 | 41.1 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 50.57 | 40.83 |
| CDY41501 | Canola | cytosol | 43.18 | 40.21 |
| CDY48161 | Canola | plastid | 41.48 | 39.89 |
| CDY39571 | Canola | plastid | 40.91 | 39.34 |
| CDX84387 | Canola | nucleus | 43.75 | 39.29 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 42.61 | 39.27 |
| CDY72321 | Canola | plastid | 39.77 | 39.11 |
| GSMUA_Achr8P16400_001 | Banana | plastid | 44.32 | 38.61 |
| Os11t0444900-01 | Rice | cytosol, plastid | 46.02 | 37.5 |
| TraesCS6D01G198500.1 | Wheat | plastid | 41.48 | 36.5 |
| TraesCS6B01G245800.1 | Wheat | plastid | 40.91 | 36.36 |
| TraesCS6A01G217000.1 | Wheat | plastid | 41.48 | 36.32 |
| Os11t0444700-01 | Rice | cytosol | 44.89 | 35.27 |
| GSMUA_Achr6P06660_001 | Banana | plastid | 47.73 | 34.71 |
| EES09698 | Sorghum | cytosol | 43.75 | 32.63 |
| HORVU6Hr1G055230.3 | Barley | cytosol | 40.91 | 30.9 |
| Zm00001d049157_P001 | Maize | plastid | 36.93 | 28.51 |
| CDY21444 | Canola | mitochondrion | 35.23 | 23.48 |
| CDX83177 | Canola | mitochondrion | 34.09 | 22.56 |
| CDY16375 | Canola | nucleus | 35.8 | 22.34 |
| CDX91540 | Canola | nucleus | 35.8 | 22.34 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 28.41 | 19.3 |
| CDY24410 | Canola | cytosol | 27.84 | 18.99 |
| CDY31319 | Canola | nucleus | 28.98 | 18.28 |
| CDY21590 | Canola | nucleus | 34.09 | 12.63 |
| CDY62874 | Canola | nucleus | 28.41 | 12.59 |
| CDX69896 | Canola | nucleus | 33.52 | 12.55 |
| CDY58263 | Canola | nucleus | 34.09 | 12.53 |
| CDY46377 | Canola | nucleus | 27.84 | 12.37 |
| CDX84525 | Canola | nucleus | 34.09 | 12.37 |
| CDY46804 | Canola | nucleus | 32.95 | 12.18 |
| CDX91230 | Canola | nucleus | 28.41 | 11.31 |
| CDX97304 | Canola | nucleus | 28.41 | 11.26 |
| CDX78676 | Canola | plastid | 27.27 | 10.69 |
| CDX70680 | Canola | plastid | 27.84 | 10.63 |
| CDY25942 | Canola | nucleus, plastid | 35.8 | 10.03 |
| CDX69461 | Canola | plastid | 27.27 | 9.9 |
| CDY40994 | Canola | cytosol | 31.82 | 9.82 |
| CDY24442 | Canola | cytosol | 31.82 | 9.81 |
| CDY41073 | Canola | nucleus, plastid | 34.66 | 9.67 |
| CDY68695 | Canola | nucleus | 30.11 | 9.64 |
| CDX92217 | Canola | cytosol | 31.25 | 9.39 |
| CDY17690 | Canola | nucleus, plastid | 35.8 | 8.7 |
| CDY66514 | Canola | nucleus | 31.25 | 8.54 |
Protein Annotations
| EnsemblPlants:CDY28543 | EnsemblPlantsGene:GSBRNA2T00040475001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF1 | PFAM:PF00564 | ProteinID:CDY28543 |
| ProteinID:CDY28543.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EBCA60 | UniProt:A0A078GV85 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g36170DBnaC02g36170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV85]
Coordinates
chrLK032221:+:537377..538162
Molecular Weight (calculated)
19299.1 Da
IEP (calculated)
9.214
GRAVY (calculated)
-0.355
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTNSTIKFL CSYGGKILPR YPDGKLRYNG GHTRVLAVPR SVSFSELASK MAEMCGSTVT IRCQLPTEDL DAPVSVTSDE DLANLIEEYD LVSSSSPMKI
101: RVFLNPPKST IAPPPLALPS PNTSSSSSSP RSPSMSKPPL PLSPPRLTTV KNQCYGCYFH RNSRNVYLVH NGNHWQ
101: RVFLNPPKST IAPPPLALPS PNTSSSSSSP RSPSMSKPPL PLSPPRLTTV KNQCYGCYFH RNSRNVYLVH NGNHWQ
001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
Arabidopsis Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.