Factsheet for HORVU6Hr1G055230.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G198500.1	Wheat	plastid	79.4	92.5
TraesCS6B01G245800.1	Wheat	plastid	78.54	92.42
TraesCS6A01G217000.1	Wheat	plastid	78.54	91.04
Os11t0444900-01	Rice	cytosol, plastid	58.37	62.96
Os11t0444700-01	Rice	cytosol	56.65	58.93
GSMUA_Achr3P19440_001	Banana	plastid	37.34	54.04
EES09698	Sorghum	cytosol	54.08	53.39
Zm00001d049157_P001	Maize	plastid	48.5	49.56
GSMUA_Achr10P...	Banana	cytosol	40.77	46.12
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	42.49	45.41
KRH29762	Soybean	plastid	22.32	43.7
CDY66304	Canola	cytosol	30.04	42.17
GSMUA_Achr8P16400_001	Banana	plastid	36.05	41.58
Bra016197.1-P	Field mustard	mitochondrion	29.18	40.96
CDY61217	Canola	cytosol, mitochondrion	29.18	40.96
CDY28543	Canola	plastid	30.9	40.91
Bra032936.1-P	Field mustard	plastid	31.33	40.78
CDX83621	Canola	mitochondrion	31.33	40.33
CDY48987	Canola	plastid	30.47	39.66
KRH45586	Soybean	plastid	30.9	39.56
VIT_00s0291g00050.t01	Wine grape	plastid	32.62	38.97
Bra025209.1-P	Field mustard	mitochondrion	30.04	38.67
CDY13638	Canola	mitochondrion	30.04	38.67
AT1G70640.1	Thale cress	cytosol	27.47	36.78
CDY20093	Canola	extracellular, plasma membrane	29.61	35.57
GSMUA_Achr6P06660_001	Banana	plastid	36.48	35.12
KRH69636	Soybean	plastid	31.76	34.91
KRH74522	Soybean	nucleus	33.05	33.33
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	33.05	32.77
Solyc05g013530.2.1	Tomato	plastid	30.47	32.42
HORVU3Hr1G008310.1	Barley	cytosol	12.02	19.58
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	18.03	14.14
HORVU2Hr1G041600.1	Barley	mitochondrion	17.17	13.24
HORVU4Hr1G026270.1	Barley	cytosol	17.6	12.42
HORVU1Hr1G065470.6	Barley	mitochondrion	22.75	12.21
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	22.75	9.62
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	21.46	5.91
HORVU3Hr1G064760.1	Barley	cytosol	3.43	4.12

Protein Annotations

EnsemblPlants:HORVU6Hr1G055230.3	EnsemblPlantsGene:HORVU6Hr1G055230	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564	SEG:seg
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000B47B449	UniProt:A0A287U8G6	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr6H:+:351516966..351518021

Molecular Weight (calculated)

25207.1 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.460

Length

233 amino acids

Sequence
(BLAST)

001: RAGCRGREGC RHSGRLMRQI GDPGATVCRK EGMAGASSWS SSCSCTSSLG SLDDDDVVCI VKPGSPGPGA AEGSVKFLCS YGGMILPRHP DGALRYVGGN
101: NRVLSVDRSL QFHGTCRKLT DMCGWEAMSL RCQLPTEDLD ALVSVTTNDD LGHLLEEYDA ASRDRLQPLK IRAFLFPRAK TPPISPPTPS SSRPTPGYVR
201: HQHHAARPPP ARVHSGHRRP HQLLLVHNGS RLL

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.