Factsheet for GSMUA_Achr8P16400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plasma membrane 1
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	54.95	53.88
GSMUA_Achr3P19440_001	Banana	plastid	42.57	53.42
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	56.93	52.75
KRH29762	Soybean	plastid	28.71	48.74
Os11t0444900-01	Rice	cytosol, plastid	50.0	46.76
Os11t0444700-01	Rice	cytosol	49.51	44.64
CDY28543	Canola	plastid	38.61	44.32
Bra032936.1-P	Field mustard	plastid	39.11	44.13
CDY66304	Canola	cytosol	36.14	43.98
CDY48987	Canola	plastid	38.61	43.58
TraesCS6D01G198500.1	Wheat	plastid	43.07	43.5
CDY61217	Canola	cytosol, mitochondrion	35.64	43.37
TraesCS6A01G217000.1	Wheat	plastid	43.07	43.28
VIT_00s0291g00050.t01	Wine grape	plastid	41.58	43.08
TraesCS6B01G245800.1	Wheat	plastid	42.08	42.93
Bra016197.1-P	Field mustard	mitochondrion	35.15	42.77
KRH45586	Soybean	plastid	38.12	42.31
CDX83621	Canola	mitochondrion	37.13	41.44
Bra025209.1-P	Field mustard	mitochondrion	35.15	39.23
CDY13638	Canola	mitochondrion	35.15	39.23
KRH69636	Soybean	plastid	40.59	38.68
AT1G70640.1	Thale cress	cytosol	33.17	38.51
Zm00001d049157_P001	Maize	plastid	43.07	38.16
CDY20093	Canola	extracellular, plasma membrane	36.14	37.63
GSMUA_Achr6P06660_001	Banana	plastid	45.05	37.6
HORVU6Hr1G055230.3	Barley	cytosol	41.58	36.05
EES09698	Sorghum	cytosol	42.08	36.02
KRH74522	Soybean	nucleus	41.09	35.93
Solyc05g013530.2.1	Tomato	plastid	38.61	35.62
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	38.61	33.19
GSMUA_Achr11P...	Banana	plastid	28.22	18.57
GSMUA_Achr3P21900_001	Banana	nucleus	30.2	16.58
GSMUA_Achr4P33650_001	Banana	mitochondrion	25.25	16.45
GSMUA_Achr10P...	Banana	nucleus	25.74	15.38
GSMUA_AchrUn_...	Banana	nucleus	26.24	13.73
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	23.76	11.59
GSMUA_Achr1P05710_001	Banana	cytosol	23.27	9.65
GSMUA_Achr2P07240_001	Banana	nucleus	25.74	9.45
GSMUA_Achr8P18320_001	Banana	nucleus	23.76	9.27
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	28.71	8.25
GSMUA_Achr1P21240_001	Banana	nucleus	24.26	8.17
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	28.22	8.14

Protein Annotations

EnsemblPlants:GSMUA_Achr8P16400_001	EnsemblPlants:GSMUA_Achr8T16400_001	EnsemblPlantsGene:GSMUA_Achr8G16400_001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000295F006	UniProt:M0TQZ3	MapMan:35.2

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G16400_001]

Coordinates

chr8:+:14221063..14222143

Molecular Weight (calculated)

21840.0 Da

IEP (calculated)

7.380

GRAVY (calculated)

-0.107

Length

202 amino acids

Sequence
(BLAST)

001: MAGTSSSASY SSFGDVSVKS TGPCIKFLCS YGGKILPRYP DGKLRYVGGY TRVVAIGRSI SFSELQVKLR ELCGWGGTVS LRCQLPTEDL DTLVSVTSDD
101: DLADLVEEYD VASRDRPSPL KIRAFLLLLL LQNQSHHPSE PTASAMSSCT RAGIFASTAM AAHEHQTVSC VTSAACCRCH LGKKEEHIKI DANGKRFLIT
201: DD

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.