CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13638	Canola	mitochondrion	93.92	93.92
CDY48987	Canola	plastid	89.5	90.5
CDY28543	Canola	plastid	87.85	90.34
CDY66304	Canola	cytosol	51.38	56.02
VIT_00s0291g00050.t01	Wine grape	plastid	60.22	55.9
CDY61217	Canola	cytosol, mitochondrion	50.28	54.82
KRH29762	Soybean	plastid	35.36	53.78
KRH69636	Soybean	plastid	58.01	49.53
CDY20093	Canola	extracellular, plasma membrane	50.83	47.42
KRH74522	Soybean	nucleus	59.12	46.32
GSMUA_Achr3P19440_001	Banana	plastid	40.88	45.96
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	55.25	42.55
Solyc05g013530.2.1	Tomato	plastid	51.38	42.47
GSMUA_Achr10P...	Banana	cytosol	48.07	42.23
CDY41501	Canola	cytosol	43.65	41.8
CDY48161	Canola	plastid	41.99	41.53
CDY48129	Canola	cytosol, nucleus, plastid	43.65	41.36
CDY72321	Canola	plastid	40.88	41.34
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	49.72	41.28
CDY39571	Canola	plastid	41.44	40.98
CDX84387	Canola	nucleus	43.65	40.31
Os11t0444900-01	Rice	cytosol, plastid	45.3	37.96
TraesCS6B01G245800.1	Wheat	plastid	40.88	37.37
GSMUA_Achr8P16400_001	Banana	plastid	41.44	37.13
TraesCS6D01G198500.1	Wheat	plastid	40.88	37.0
TraesCS6A01G217000.1	Wheat	plastid	40.88	36.82
Os11t0444700-01	Rice	cytosol	44.2	35.71
EES09698	Sorghum	cytosol	45.3	34.75
GSMUA_Achr6P06660_001	Banana	plastid	46.41	34.71
HORVU6Hr1G055230.3	Barley	cytosol	40.33	31.33
Zm00001d049157_P001	Maize	plastid	38.67	30.7
CDY21444	Canola	mitochondrion	34.81	23.86
CDX83177	Canola	mitochondrion	33.7	22.93
CDX91540	Canola	nucleus	34.81	22.34
CDY16375	Canola	nucleus	34.81	22.34
CDY24410	Canola	cytosol	27.62	19.38
CDY36115	Canola	cytosol, nucleus, vacuole	27.62	19.3
CDY31319	Canola	nucleus	28.73	18.64
CDY62874	Canola	nucleus	28.73	13.1
CDY46377	Canola	nucleus	28.18	12.88
CDY58263	Canola	nucleus	33.7	12.73
CDY21590	Canola	nucleus	33.15	12.63
CDY46804	Canola	nucleus	33.15	12.61
CDX84525	Canola	nucleus	33.7	12.58
CDX69896	Canola	nucleus	32.6	12.55
CDX91230	Canola	nucleus	28.73	11.76
CDX97304	Canola	nucleus	28.73	11.71
CDX78676	Canola	plastid	27.62	11.14
CDX70680	Canola	plastid	27.62	10.85
CDY68695	Canola	nucleus	32.04	10.55
CDY40994	Canola	cytosol	33.15	10.53
CDY24442	Canola	cytosol	33.15	10.51
CDX92217	Canola	cytosol	33.15	10.24
CDX69461	Canola	plastid	27.07	10.1
CDY25942	Canola	nucleus, plastid	33.7	9.71
CDY41073	Canola	nucleus, plastid	33.15	9.51
CDY66514	Canola	nucleus	33.15	9.32
CDY17690	Canola	nucleus, plastid	35.36	8.84

Protein Annotations

EnsemblPlants:CDX83621	EnsemblPlantsGene:GSBRNA2T00139289001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564	ProteinID:CDX83621
ProteinID:CDX83621.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0004EB6F00	MapMan:35.2

Description

BnaC07g23610D

Coordinates

chrLK031833:-:1105107..1105821

Molecular Weight (calculated)

19713.5 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.322

Length

181 amino acids

Sequence
(BLAST)

001: MVTNSTIKFL CSYGGKILPR YPDGKLRYNG GHTRVLAVPR SISFSELASK MAEMCGSAVT IRCQLPTEDL DALVSITCDE DLANLIEEYD LVSSSVKIRV
101: FLNPPRSAKS TASPPPLALP SSTTSSSSST SSSPRSPSLS KPPLPPSPPR LTTVKNQCYG CYVHHRSSRN MYLVHNGNHW Q

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.