Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 91.09 | 90.38 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 89.92 | 89.58 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 62.4 | 59.19 |
| Zm00001d003965_P001 | Maize | mitochondrion | 18.22 | 42.73 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 16.67 | 30.07 |
| CDY28543 | Canola | plastid | 18.99 | 27.84 |
| CDY66304 | Canola | cytosol | 17.83 | 27.71 |
| CDY61217 | Canola | cytosol, mitochondrion | 17.83 | 27.71 |
| CDX83621 | Canola | mitochondrion | 19.38 | 27.62 |
| CDY48987 | Canola | plastid | 18.99 | 27.37 |
| CDY13638 | Canola | mitochondrion | 18.99 | 27.07 |
| CDY41501 | Canola | cytosol | 18.6 | 25.4 |
| CDX84387 | Canola | nucleus | 18.6 | 24.49 |
| CDY39571 | Canola | plastid | 17.05 | 24.04 |
| CDY48161 | Canola | plastid | 17.05 | 24.04 |
| CDY20093 | Canola | extracellular, plasma membrane | 17.83 | 23.71 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 17.05 | 23.04 |
| CDY72321 | Canola | plastid | 15.89 | 22.91 |
| GSMUA_Achr10P... | Banana | nucleus | 28.29 | 21.6 |
| CDY31319 | Canola | nucleus | 23.26 | 21.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.01 | 20.73 |
| CDY21444 | Canola | mitochondrion | 18.99 | 18.56 |
| CDX83177 | Canola | mitochondrion | 18.99 | 18.42 |
| CDY16375 | Canola | nucleus | 19.77 | 18.09 |
| CDX91540 | Canola | nucleus | 19.77 | 18.09 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 33.72 | 16.8 |
| CDY68695 | Canola | nucleus | 35.66 | 16.73 |
| CDY40994 | Canola | cytosol | 36.82 | 16.67 |
| CDY24442 | Canola | cytosol | 36.82 | 16.64 |
| CDX92217 | Canola | cytosol | 36.05 | 15.87 |
| CDY46377 | Canola | nucleus | 24.03 | 15.66 |
| CDY62874 | Canola | nucleus | 24.03 | 15.62 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 32.95 | 15.45 |
| CDX78676 | Canola | plastid | 26.74 | 15.37 |
| CDY25942 | Canola | nucleus, plastid | 36.82 | 15.13 |
| CDX70680 | Canola | plastid | 26.74 | 14.97 |
| CDY41073 | Canola | nucleus, plastid | 36.05 | 14.74 |
| CDY21590 | Canola | nucleus | 27.13 | 14.74 |
| CDY46804 | Canola | nucleus | 27.13 | 14.71 |
| CDX69896 | Canola | nucleus | 26.74 | 14.68 |
| CDX69461 | Canola | plastid | 27.52 | 14.64 |
| CDY66514 | Canola | nucleus | 36.43 | 14.6 |
| CDX91230 | Canola | nucleus | 24.81 | 14.48 |
| CDX97304 | Canola | nucleus | 24.81 | 14.41 |
| Zm00001d039916_P010 | Maize | nucleus | 36.05 | 14.11 |
| EES00348 | Sorghum | nucleus | 36.05 | 14.03 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 32.56 | 14.0 |
| Zm00001d008591_P001 | Maize | mitochondrion | 36.05 | 13.98 |
| CDY58263 | Canola | nucleus | 25.58 | 13.78 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 37.21 | 13.71 |
| CDY17690 | Canola | nucleus, plastid | 38.37 | 13.67 |
| Os01t0139200-01 | Rice | nucleus | 35.27 | 13.56 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 36.82 | 13.51 |
| CDX84525 | Canola | nucleus | 25.19 | 13.4 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 33.33 | 12.97 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 34.11 | 12.5 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 31.78 | 12.39 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 34.5 | 10.52 |
Protein Annotations
| EnsemblPlants:CDY24410 | EnsemblPlantsGene:GSBRNA2T00026652001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 | PFAM:PF00564 | ProteinID:CDY24410 |
| ProteinID:CDY24410.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EF29A1 | UniProt:A0A078GD24 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng04770DBnaCnng04770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD24]
Coordinates
chrLK032158:-:273914..274690
Molecular Weight (calculated)
28867.5 Da
IEP (calculated)
5.950
GRAVY (calculated)
-0.321
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPLAPSLTP KLRLLCSYGG RITLIPPSNS LEYIGGETRI VAVPRDISFT AFSQLLSDKL LHGRSFSLKY RPPSCDLDSL ITVTNNEDLQ NMIAEYDSAS
101: PQRIRLFLFP LNYPESSTRH PLSVNLLGLE PPIQKIIYTS SSSVVPFPKF PQNNDTTTKR VDHGNIHAMS DEDPITSASL NTGVSDKETE REEIQDQPRR
201: IVIQEPLQQH QFLPIFYLPV LPMQPHMVTR SVNGYALSPA MEYSTGADLV LENKKTAT
101: PQRIRLFLFP LNYPESSTRH PLSVNLLGLE PPIQKIIYTS SSSVVPFPKF PQNNDTTTKR VDHGNIHAMS DEDPITSASL NTGVSDKETE REEIQDQPRR
201: IVIQEPLQQH QFLPIFYLPV LPMQPHMVTR SVNGYALSPA MEYSTGADLV LENKKTAT
001: MEPQPSLNPK LHLLCSYGGR IMPLPPEKSL HYIGGETRLV IVPRGISFLD FFKLLSDKLL SGRSFSLKYK LPSCDFDSLI TVSDNEDLQN MIAEYDSTRL
101: RRIRLFLFPL NHVELTRQSV TVNRLLGLES PIFTSLSSVL SSPIFAPNNG PVQFVHHNKV NATTAEENRR QDEAASTTSS SMLPQENTSA ANDVGGFLDR
201: ETEIVEIQDQ PRPILQEPLP QQQQQPLIIC YLPVWQMRPH MVTYPVAAYA LTPATEHSPR LDPVPENQEN AT
101: RRIRLFLFPL NHVELTRQSV TVNRLLGLES PIFTSLSSVL SSPIFAPNNG PVQFVHHNKV NATTAEENRR QDEAASTTSS SMLPQENTSA ANDVGGFLDR
201: ETEIVEIQDQ PRPILQEPLP QQQQQPLIIC YLPVWQMRPH MVTYPVAAYA LTPATEHSPR LDPVPENQEN AT
Arabidopsis Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRH9]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.