Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016197.1-P | Field mustard | mitochondrion | 97.59 | 97.59 |
| CDY61217 | Canola | cytosol, mitochondrion | 96.39 | 96.39 |
| CDY20093 | Canola | extracellular, plasma membrane | 97.59 | 83.51 |
| AT1G70640.1 | Thale cress | cytosol | 73.49 | 70.11 |
| CDX83621 | Canola | mitochondrion | 56.02 | 51.38 |
| CDY48987 | Canola | plastid | 54.82 | 50.84 |
| CDY28543 | Canola | plastid | 53.01 | 50.0 |
| CDY13638 | Canola | mitochondrion | 53.01 | 48.62 |
| GSMUA_Achr3P19440_001 | Banana | plastid | 43.37 | 44.72 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 51.2 | 38.99 |
| CDY39571 | Canola | plastid | 42.77 | 38.8 |
| CDY48161 | Canola | plastid | 42.77 | 38.8 |
| CDY41501 | Canola | cytosol | 43.98 | 38.62 |
| CDY72321 | Canola | plastid | 40.96 | 37.99 |
| GSMUA_Achr10P... | Banana | cytosol | 46.39 | 37.38 |
| CDX84387 | Canola | nucleus | 43.98 | 37.24 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 42.17 | 36.65 |
| GSMUA_Achr8P16400_001 | Banana | plastid | 43.98 | 36.14 |
| TraesCS6B01G245800.1 | Wheat | plastid | 42.17 | 35.35 |
| TraesCS6A01G217000.1 | Wheat | plastid | 42.17 | 34.83 |
| TraesCS6D01G198500.1 | Wheat | plastid | 41.57 | 34.5 |
| Os11t0444900-01 | Rice | cytosol, plastid | 44.58 | 34.26 |
| Os11t0444700-01 | Rice | cytosol | 44.58 | 33.04 |
| GSMUA_Achr6P06660_001 | Banana | plastid | 46.39 | 31.82 |
| EES09698 | Sorghum | cytosol | 45.18 | 31.78 |
| HORVU6Hr1G055230.3 | Barley | cytosol | 42.17 | 30.04 |
| Zm00001d049157_P001 | Maize | plastid | 40.96 | 29.82 |
| CDX83177 | Canola | mitochondrion | 35.54 | 22.18 |
| CDY21444 | Canola | mitochondrion | 34.94 | 21.97 |
| CDX91540 | Canola | nucleus | 36.75 | 21.63 |
| CDY16375 | Canola | nucleus | 36.75 | 21.63 |
| CDY36115 | Canola | cytosol, nucleus, vacuole | 29.52 | 18.92 |
| CDY24410 | Canola | cytosol | 27.71 | 17.83 |
| CDY31319 | Canola | nucleus | 28.31 | 16.85 |
| CDY46377 | Canola | nucleus | 33.73 | 14.14 |
| CDY62874 | Canola | nucleus | 33.13 | 13.85 |
| CDX97304 | Canola | nucleus | 34.34 | 12.84 |
| CDX91230 | Canola | nucleus | 33.73 | 12.67 |
| CDX69896 | Canola | nucleus | 32.53 | 11.49 |
| CDY21590 | Canola | nucleus | 32.53 | 11.37 |
| CDY58263 | Canola | nucleus | 32.53 | 11.27 |
| CDX84525 | Canola | nucleus | 31.33 | 10.72 |
| CDY46804 | Canola | nucleus | 30.12 | 10.5 |
| CDX78676 | Canola | plastid | 24.7 | 9.13 |
| CDY68695 | Canola | nucleus | 30.12 | 9.09 |
| CDY24442 | Canola | cytosol | 30.72 | 8.93 |
| CDX70680 | Canola | plastid | 24.7 | 8.89 |
| CDY40994 | Canola | cytosol | 30.12 | 8.77 |
| CDX92217 | Canola | cytosol | 30.12 | 8.53 |
| CDX69461 | Canola | plastid | 24.1 | 8.25 |
| CDY66514 | Canola | nucleus | 30.72 | 7.92 |
| CDY25942 | Canola | nucleus, plastid | 29.52 | 7.8 |
| CDY41073 | Canola | nucleus, plastid | 27.71 | 7.29 |
| CDY17690 | Canola | nucleus, plastid | 31.33 | 7.18 |
Protein Annotations
| EnsemblPlants:CDY66304 | EnsemblPlantsGene:GSBRNA2T00053341001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF1 | PFAM:PF00564 | ProteinID:CDY66304 |
| ProteinID:CDY66304.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EEA238 | UniProt:A0A078JI20 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA07g38840DBnaA07g38840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI20]
Coordinates
chrLK035189:-:1069..1919
Molecular Weight (calculated)
18267.8 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.304
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTVKFLCSY GGRIIPRYPD NKLRYHGGHT RVLSVKRSIS FAELAVKLGE VCGMKVISLR CQLPTDDLDA LVTVSSDEDL ANLMEEYDLA ATALKIRVFL
101: SPPLSTTSSS SSSNSSTSRS CSPSSPSTVS PKTCPVCVER SHHRNTNKGC YVQRSPSRDQ FYLVRN
101: SPPLSTTSSS SSSNSSTSRS CSPSSPSTVS PKTCPVCVER SHHRNTNKGC YVQRSPSRDQ FYLVRN
001: MVPNTTTVKF LCSYGGRITP RYPDGKLRYQ GGDTRVLSVT RAISFTELKK KLGEICGIAV TSLRCQLPTD DLDALVTVRS DEDLKNLMEE YDLAITAQVK
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
101: IHVFLSPLKS TRTTANSSPP PSTTSSSSSK SRSRSPPSPS TPETCPSCVE RSIRNNGCYV HRSPSHNQLY FINN
Arabidopsis Description
At1g70640 [Source:UniProtKB/TrEMBL;Acc:Q9S843]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.