Factsheet for GSMUA_Achr6P06660_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P19440_001	Banana	plastid	49.59	74.53
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	47.93	53.21
KRH29762	Soybean	plastid	24.38	49.58
GSMUA_Achr10P...	Banana	cytosol	41.74	49.03
Bra032936.1-P	Field mustard	plastid	35.54	48.04
CDY28543	Canola	plastid	34.71	47.73
CDY48987	Canola	plastid	35.12	47.49
Bra025209.1-P	Field mustard	mitochondrion	34.71	46.41
CDX83621	Canola	mitochondrion	34.71	46.41
CDY13638	Canola	mitochondrion	34.71	46.41
CDY66304	Canola	cytosol	31.82	46.39
Os11t0444900-01	Rice	cytosol, plastid	40.5	45.37
Bra016197.1-P	Field mustard	mitochondrion	30.99	45.18
CDY61217	Canola	cytosol, mitochondrion	30.99	45.18
GSMUA_Achr8P16400_001	Banana	plastid	37.6	45.05
TraesCS6D01G198500.1	Wheat	plastid	37.19	45.0
TraesCS6A01G217000.1	Wheat	plastid	37.19	44.78
VIT_00s0291g00050.t01	Wine grape	plastid	35.54	44.1
TraesCS6B01G245800.1	Wheat	plastid	35.95	43.94
Os11t0444700-01	Rice	cytosol	40.08	43.3
KRH45586	Soybean	plastid	31.82	42.31
AT1G70640.1	Thale cress	cytosol	30.17	41.95
Zm00001d049157_P001	Maize	plastid	37.6	39.91
EES09698	Sorghum	cytosol	38.84	39.83
CDY20093	Canola	extracellular, plasma membrane	31.41	39.18
KRH69636	Soybean	plastid	33.47	38.21
Solyc05g013530.2.1	Tomato	plastid	33.06	36.53
HORVU6Hr1G055230.3	Barley	cytosol	35.12	36.48
KRH74522	Soybean	nucleus	32.64	34.2
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	33.06	34.04
GSMUA_Achr11P...	Banana	plastid	25.62	20.2
GSMUA_Achr3P21900_001	Banana	nucleus	26.03	17.12
GSMUA_Achr4P33650_001	Banana	mitochondrion	20.66	16.13
GSMUA_Achr10P...	Banana	nucleus	21.9	15.68
GSMUA_AchrUn_...	Banana	nucleus	22.31	13.99
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	20.25	11.84
GSMUA_Achr2P07240_001	Banana	nucleus	21.9	9.64
GSMUA_Achr8P18320_001	Banana	nucleus	19.83	9.27
GSMUA_Achr1P05710_001	Banana	cytosol	18.59	9.24
GSMUA_Achr1P21240_001	Banana	nucleus	20.66	8.33
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	23.55	8.14
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	23.14	7.97

Protein Annotations

EnsemblPlants:GSMUA_Achr6P06660_001	EnsemblPlants:GSMUA_Achr6T06660_001	EnsemblPlantsGene:GSMUA_Achr6G06660_001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002968AE3	UniProt:M0T4R4	MapMan:35.2

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G06660_001]

Coordinates

chr6:-:4506253..4508106

Molecular Weight (calculated)

26588.2 Da

IEP (calculated)

9.271

GRAVY (calculated)

-0.061

Length

242 amino acids

Sequence
(BLAST)

001: MVGTSCSSSS SCASFGSFDA DAAAAKRSPT AATIKFLCSY GGKILPRYPD GKLRYIGGDT RVLAVDRSVP FSELQEKMRE MCGWVAVSLR CQLPTEDLDA
101: LVSVKSDEDL ANIMEEYDLA GREKIRAFLF PPSPAPYPQE IYVTVPITTI PNITTITIIS MATMRFQSRA TISCIKEASG SSSTTATKEK NSRLLRGAVN
201: RFIAGPCIFV GTRNRCAGHN KFIHHIYLDI PKHKKTFIFI LK

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.