Factsheet for GSMUA_Achr11P26400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P21900_001	Banana	nucleus	55.7	46.47
GSMUA_Achr3P19440_001	Banana	plastid	17.59	33.54
KRH26304	Soybean	nucleus	27.04	31.8
Bra000599.1-P	Field mustard	mitochondrion	25.73	29.81
CDX83177	Canola	mitochondrion	25.73	29.7
CDY21444	Canola	mitochondrion	25.41	29.55
KRH06059	Soybean	nucleus	25.73	29.48
Bra022508.1-P	Field mustard	nucleus	26.71	29.08
CDX91540	Canola	nucleus	26.71	29.08
CDY16375	Canola	nucleus	26.71	29.08
GSMUA_Achr10P...	Banana	cytosol	19.22	28.64
GSMUA_Achr8P16400_001	Banana	plastid	18.57	28.22
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	19.54	27.52
AT5G49920.1	Thale cress	nucleus	24.43	26.04
PGSC0003DMT400097584	Potato	nucleus	30.94	25.82
TraesCS1A01G266900.1	Wheat	nucleus	30.62	25.75
TraesCS1D01G267100.1	Wheat	nucleus	30.62	25.68
GSMUA_Achr6P06660_001	Banana	plastid	20.2	25.62
Os05t0427100-01	Rice	cytosol	29.97	25.14
OQU78054	Sorghum	cytosol	29.64	24.86
Zm00001d010214_P003	Maize	cytosol	30.94	24.23
VIT_12s0035g01050.t01	Wine grape	extracellular, golgi	29.97	23.77
TraesCS1B01G277800.1	Wheat	cytosol, mitochondrion	30.62	23.15
HORVU1Hr1G065470.6	Barley	mitochondrion	30.62	21.66
GSMUA_Achr4P33650_001	Banana	mitochondrion	18.57	18.39
GSMUA_Achr10P...	Banana	nucleus	16.94	15.38
GSMUA_AchrUn_...	Banana	nucleus	18.57	14.77
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	17.92	13.29
GSMUA_Achr1P05710_001	Banana	cytosol	17.59	11.09
GSMUA_Achr8P18320_001	Banana	nucleus	16.94	10.04
GSMUA_Achr1P21240_001	Banana	nucleus	18.89	9.67
GSMUA_Achr2P07240_001	Banana	nucleus	17.26	9.64
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	20.2	8.82
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	19.87	8.71

Protein Annotations

EnsemblPlants:GSMUA_Achr11P26400_001	EnsemblPlants:GSMUA_Achr11T26400_001	EnsemblPlantsGene:GSMUA_Achr11G26400_001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PFAM:PF00564	SEG:seg
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002968964	UniProt:M0RVM0	MapMan:35.2	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G26400_001]

Coordinates

chr11:+:25234796..25235808

Molecular Weight (calculated)

32927.0 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.390

Length

307 amino acids

Sequence
(BLAST)

001: MTRTAPGGSS SSSSSSPSVS PRNRLKFLCS YGGKILPHPS ENHLRYVGGD TRVLVVTRSI SFSELKERIQ EMFHCCVAIK YELVAKDVEA LVSVTCDEDL
101: AYMLDEYDRL DARQPRFRLF LFPSPSSNLA AVTADDQRQV GGVPGSPRRP ISAASSSATS TIDGQASILA LRLNALTAND GGGGTHRVRS APNLRGGGLL
201: SQIANGAVGQ YHHNHPEQHV LRRQKSSGAS SYGSHAAGGS RALRACGAKL REVCRCGAGC RVTWVPQPAA VGGLHYSDRR GMCFGHAEES SSRRLSRCSW
301: PPPKPVR

Best Arabidopsis Sequence Match ( AT5G49920.1 )
(BLAST)

001: MAEERSPSKV KFMCSFGGRI LPRPSDSVLK YVGGETRVVA VSPDISFSEL MKKLTAITEN DIVLKYQIIP EDLDALVSVK SDEDVKHMIE EYNRHETPKL
101: RTFLFPANPV VLESQLGPIE PQTIEQRYIE AINGILRTSK SATALRAPIK TRPSFTVSTC SSPKSESPDG YSHEPPETSF QNNYQLSRLY PMHRVHSSPN
201: ISHQLQPHSH YHNHNHNAYV QPPTNYLTCR PRLPTPLEIP RGIGWDQSYT TTHNSGGGNG KYGCNDDRRF WGRASSVPQS PRNHGLRL

Arabidopsis Description

At5g49920 [Source:UniProtKB/TrEMBL;Acc:Q9LTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.