CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049157_P001	Maize	plastid	77.12	79.82
Os11t0444900-01	Rice	cytosol, plastid	62.29	68.06
TraesCS6D01G198500.1	Wheat	plastid	55.51	65.5
TraesCS6B01G245800.1	Wheat	plastid	54.66	65.15
TraesCS6A01G217000.1	Wheat	plastid	55.08	64.68
Os11t0444700-01	Rice	cytosol	59.32	62.5
GSMUA_Achr3P19440_001	Banana	plastid	39.41	57.76
HORVU6Hr1G055230.3	Barley	cytosol	53.39	54.08
GSMUA_Achr10P...	Banana	cytosol	42.8	49.03
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	43.64	47.25
CDX83621	Canola	mitochondrion	34.75	45.3
CDY66304	Canola	cytosol	31.78	45.18
VIT_00s0291g00050.t01	Wine grape	plastid	36.86	44.62
Bra032936.1-P	Field mustard	plastid	33.47	44.13
Bra016197.1-P	Field mustard	mitochondrion	30.93	43.98
CDY61217	Canola	cytosol, mitochondrion	30.93	43.98
CDY28543	Canola	plastid	32.63	43.75
CDY48987	Canola	plastid	33.05	43.58
KRH45586	Soybean	plastid	33.47	43.41
CDY13638	Canola	mitochondrion	33.05	43.09
Bra025209.1-P	Field mustard	mitochondrion	33.05	43.09
KRH29762	Soybean	plastid	21.61	42.86
GSMUA_Achr8P16400_001	Banana	plastid	36.02	42.08
AT1G70640.1	Thale cress	cytosol	30.51	41.38
KRH69636	Soybean	plastid	36.44	40.57
GSMUA_Achr6P06660_001	Banana	plastid	39.83	38.84
CDY20093	Canola	extracellular, plasma membrane	31.36	38.14
Solyc05g013530.2.1	Tomato	plastid	34.75	37.44
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	36.44	36.6
KRH74522	Soybean	nucleus	35.59	36.36
KXG37809	Sorghum	cytosol	19.49	19.91
OQU91169	Sorghum	cytosol	18.64	18.11
OQU78054	Sorghum	cytosol	23.31	15.03
EER99518	Sorghum	plastid	22.88	13.78
EES07730	Sorghum	cytosol	24.58	10.25
KXG37356	Sorghum	nucleus	14.83	10.09
EES00348	Sorghum	nucleus	24.58	8.75

Protein Annotations

EnsemblPlants:EES09698	EnsemblPlantsGene:SORBI_3005G111200	EntrezGene:8071849	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564
ProteinID:EES09698	ProteinID:EES09698.1	RefSeq:XP_002450710.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277
unigene:Sbi.8040	UniParc:UPI0001A867DC	UniProt:C5Y276	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:-:36345636..36347251

Molecular Weight (calculated)

26112.5 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.536

Length

236 amino acids

Sequence
(BLAST)

001: MAASSWSSSS SCTSSFGSLD DDVVCVIKSD SVAAAAVAEG SVKFLCSYGG RILPRHTDGT LRYVGGDNRV LSVDRPLRFY DLQRKMRELC GWEAYLRCQL
101: PTEDLDALIS VTCDDDLANL LQEYDEASKD RLQSLKIRAF LFPRTPAPAS SIPRSSPPSS PSSHSRPSPS AHLHRRNTSR APAAGVSLTC APRWWAAPRA
201: SRQAQAHQSQ NYDLRSLDEE RSHPHRYLVQ NGRHLQ

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.