CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99518	Sorghum	plastid	27.38	24.23
GSMUA_Achr4P33650_001	Banana	mitochondrion	19.31	21.61
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	16.71	20.28
PGSC0003DMT400057688	Potato	nucleus	19.31	16.11
KXG37809	Sorghum	cytosol	10.66	16.02
KRH41951	Soybean	nucleus	19.31	15.91
Solyc02g079360.1.1	Tomato	nucleus	17.58	15.84
OQU91169	Sorghum	cytosol	10.66	15.23
KRH49930	Soybean	nucleus	18.44	15.09
EES09698	Sorghum	cytosol	10.09	14.83
CDX97304	Canola	nucleus	18.73	14.64
Bra018513.1-P	Field mustard	nucleus	18.73	14.64
CDX91230	Canola	nucleus	18.44	14.48
CDY46377	Canola	nucleus	15.56	13.64
AT4G05150.1	Thale cress	nucleus	18.73	13.63
CDY62874	Canola	nucleus	15.56	13.6
Bra029559.1-P	Field mustard	nucleus	14.41	12.66
OQU78054	Sorghum	cytosol	12.97	12.3
EES07730	Sorghum	cytosol	18.73	11.48
EES00348	Sorghum	nucleus	21.33	11.16

Protein Annotations

EnsemblPlants:KXG37356	EnsemblPlantsGene:SORBI_3001G055800	PANTHER:PTHR31066	PANTHER:PTHR31066:SF4	ProteinID:KXG37356	ProteinID:KXG37356.1
SEG:seg	SUPFAM:SSF54277	UniParc:UPI00081AB26E	UniProt:A0A1B6QHG2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:+:4179273..4181108

Molecular Weight (calculated)

37489.0 Da

IEP (calculated)

10.552

GRAVY (calculated)

-0.605

Length

347 amino acids

Sequence
(BLAST)

001: MEREVAKNTR GRRINGRAKN PSGASHEHFH LPPPCQRTPI RVSSRLTARL PSRIIGSPPC RLGDGGGVGG PVAAEDDPRI VAALDRSTAS SLSWRSVRER
101: RARKRRKWAW IVRTARSLIA EGGGPMHAGH CGRGGGGDSE AGRAARARVQ VGRSAHRRSG REAARQGGLD RPLVAAPALF VTGAPRPSLK YQLHQDDLNS
201: LIFVTSDDDV DHLIDKLDRI HDLSANVARL QVAASTDQWF VDALNAPVPH PVERGRSEAS LIISEVPNYL FGLDTASDEP SPSLAAARAK SDASETPRHH
301: GDDEDDVPPS ARQMPYVTKG ASSWRGGCLT YGTHLPATST IPGWQYR

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.