Factsheet for Bra029559.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46377	Canola	nucleus	96.96	96.72
CDY62874	Canola	nucleus	94.68	94.21
Bra018513.1-P	Field mustard	nucleus	83.29	74.1
AT4G05150.1	Thale cress	nucleus	82.53	68.34
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	36.46	50.35
KRH41951	Soybean	nucleus	46.58	43.71
KRH49930	Soybean	nucleus	46.33	43.16
Solyc02g079360.1.1	Tomato	nucleus	41.01	42.08
PGSC0003DMT400057688	Potato	nucleus	44.05	41.83
GSMUA_Achr4P33650_001	Banana	mitochondrion	25.32	32.26
Bra016197.1-P	Field mustard	mitochondrion	13.42	31.93
Bra032936.1-P	Field mustard	plastid	12.41	27.37
TraesCS2A01G207800.1	Wheat	plastid	25.32	26.95
TraesCS2D01G214600.1	Wheat	plastid	25.06	26.54
Bra025209.1-P	Field mustard	mitochondrion	12.15	26.52
HORVU2Hr1G041600.1	Barley	mitochondrion	20.25	26.49
Bra038608.1-P	Field mustard	nucleus	12.91	26.29
TraesCS2B01G234400.1	Wheat	plastid	25.06	26.12
Bra018071.1-P	Field mustard	plastid	11.65	25.14
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.2	24.62
EER99518	Sorghum	plastid	24.3	24.49
Zm00001d021746_P001	Maize	plastid	23.29	24.02
Zm00001d006574_P001	Maize	plastid	22.78	24.0
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	24.81	23.17
Bra000599.1-P	Field mustard	mitochondrion	15.44	23.02
Bra022508.1-P	Field mustard	nucleus	16.2	22.7
Bra006344.1-P	Field mustard	plastid	20.25	22.54
Bra035855.1-P	Field mustard	cytosol	10.13	20.94
Bra022297.1-P	Field mustard	nucleus	27.59	19.02
Bra017462.1-P	Field mustard	cytosol, plastid	30.63	18.85
Bra022296.1-P	Field mustard	cytosol	28.1	18.75
Bra008633.1-P	Field mustard	plastid	22.28	18.14
Bra031918.1-P	Field mustard	nucleus	21.77	18.14
Bra024295.1-P	Field mustard	nucleus	19.24	17.51
Bra009393.1-P	Field mustard	nucleus	20.76	17.3
Bra037596.1-P	Field mustard	nucleus	28.1	17.26
Bra024899.1-P	Field mustard	nucleus, plastid	31.39	17.08
KXG37356	Sorghum	nucleus	12.66	14.41

Protein Annotations

EnsemblPlants:Bra029559.1	EnsemblPlants:Bra029559.1-P	EnsemblPlantsGene:Bra029559	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF4	PFAM:PF00564
SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002542612	UniProt:M4EL92	MapMan:35.2

Description

AT4G05150 (E=4e-094) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA09:-:17001144..17002486

Molecular Weight (calculated)

43938.7 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.690

Length

395 amino acids

Sequence
(BLAST)

001: MASVLPPEMD NDSMASSPRS EYDNQPRVRF MCTFGGRILP RPPDNQLCYV GGDNRMVAVH RHTTFTSLLT KLAKLSGKGN MSVKYQLPNE DLDALISVST
101: DEDVENMMEE YDRVALIQNP RSSRLRLFLF AKRTAGEEDD NDSRASSISS LLDSSVNREQ WFRAEVPDYL FGLDHFDETA PPHDRDPRAK IRREVSTLSD
201: PGSPRRDVPS PYGSTSSAPV ITSSTPELPP VKVKPESPET VLTPKADPQP EQVIQQSNIP VNSQWQYAAP GPQFHYQSPV YMVQPGNHMV QPGNHLVQPV
301: LMQGQYLPQY QHVPMVYHHQ PHQIPGPGLG QAYGETGRPV MTATDGVNRT AYYGMKTPCP VQMYYHHPGM VVPGVEEQYR TKTDTGPGPG PGQAS

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.