Factsheet for Bra022296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022297.1-P	Field mustard	nucleus	96.79	100.0
CDX92217	Canola	cytosol	97.8	98.81
Bra037596.1-P	Field mustard	nucleus	77.2	71.07
AT3G18230.1	Thale cress	nucleus, plastid	72.8	64.71
Zm00001d003965_P001	Maize	mitochondrion	9.63	51.82
HORVU3Hr1G008310.1	Barley	cytosol	11.49	47.55
GSMUA_AchrUn_...	Banana	nucleus	25.17	38.6
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.22	36.92
GSMUA_Achr10P...	Banana	nucleus	20.78	36.39
KRH39133	Soybean	cytosol	40.54	35.87
KRH48572	Soybean	cytosol	38.34	35.41
VIT_17s0000g03180.t01	Wine grape	nucleus	37.67	34.95
PGSC0003DMT400014442	Potato	nucleus	39.19	33.87
Solyc03g118870.2.1	Tomato	nucleus	36.32	33.75
Bra025209.1-P	Field mustard	mitochondrion	10.14	33.15
Bra024899.1-P	Field mustard	nucleus, plastid	39.19	31.96
Bra032936.1-P	Field mustard	plastid	9.46	31.28
GSMUA_Achr8P18320_001	Banana	nucleus	27.03	30.89
Bra017462.1-P	Field mustard	cytosol, plastid	33.45	30.84
GSMUA_Achr2P07240_001	Banana	nucleus	28.04	30.18
Bra016197.1-P	Field mustard	mitochondrion	8.28	29.52
Bra038608.1-P	Field mustard	nucleus	9.29	28.35
Bra029559.1-P	Field mustard	nucleus	18.75	28.1
Bra018071.1-P	Field mustard	plastid	8.45	27.32
GSMUA_Achr1P21240_001	Banana	nucleus	27.36	27.0
Bra006344.1-P	Field mustard	plastid	16.05	26.76
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	31.25	26.43
Zm00001d039916_P010	Maize	nucleus	29.39	26.4
EES00348	Sorghum	nucleus	29.05	25.94
Bra018513.1-P	Field mustard	nucleus	19.43	25.9
Bra035855.1-P	Field mustard	cytosol	8.28	25.65
Zm00001d008591_P001	Maize	mitochondrion	28.72	25.56
Os01t0139200-01	Rice	nucleus	28.55	25.19
TraesCS3D01G050900.1	Wheat	nucleus	28.04	25.04
Bra000599.1-P	Field mustard	mitochondrion	10.81	24.15
Bra022508.1-P	Field mustard	nucleus	11.32	23.76
TraesCS3A01G051800.1	Wheat	nucleus	28.21	23.72
TraesCS3B01G060500.1	Wheat	cytosol	26.35	23.57
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	27.87	23.47
Bra008633.1-P	Field mustard	plastid	19.09	23.3
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	28.21	19.74
Bra031918.1-P	Field mustard	nucleus	15.03	18.78
Bra024295.1-P	Field mustard	nucleus	13.51	18.43
Bra009393.1-P	Field mustard	nucleus	13.85	17.3

Protein Annotations

EnsemblPlants:Bra022296.1	EnsemblPlants:Bra022296.1-P	EnsemblPlantsGene:Bra022296	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF27	PFAM:PF00564
PFscan:PS51745	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002547361	UniProt:M4E0J9
MapMan:35.2	:	:	:	:	:

Description

AT3G18230 (E=1e-163) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA05:-:18552516..18554746

Molecular Weight (calculated)

64929.7 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.440

Length

592 amino acids

Sequence
(BLAST)

001: METPLSSIPQ LVPNLTSATM VDGSPRAVAL DTELLASVPD IKLRLMCSFG GHIMPRPHDM ALTYSSGETR LVVVDRRSSL ASLRSRLSTM LLNGRSFTLK
101: YQLPNEDLDS LVTITTDEDL ENMIEEYDRA TSSATTRATH RIRLFLFANK LETAATMGSL LNSAKSETWF VDALNQPGLL PRGLSDSAAV NNTLVNLDEE
201: TDVQELETDV GGENNKRGDY ITNNVMSHQE MHMSSMPDSP MLDTTGGSSS SSPSTANLPP IHVRVSEEQF TQMSFSNVHT QRPLEDGIGL MENQPMMVYN
301: NAPIDNVTAV RNCQASSDDD RSDPSVMVGY KKPPLPMQPL LIPLRGAGGY GLTSPDSIAS DTSISSATSV SKPLYYQEQA PAIPKVPITQ PETTLVQTSH
401: GIPPHETTPV QTTPLILSQS GTYTTVDQQH QLPVQQSILH QGVQYIPHPS QCIPVYSHQQ QNYPVYVMSV PQSQQYVPSR TPPLYPNPRP EAGQNVYQAV
501: ISQNPQVHQI QQQQLQQPLQ QPHHQYMSYS GGPVETMYFH AQRPPVSNAI PLVSPYQSMT PAAAAAALAD MSKQMTLNND KEQQNMAASQ PL

Best Arabidopsis Sequence Match ( AT3G18230.1 )
(BLAST)

001: METPLPPLSQ LTPNPTPAAA VSSAIPAPVK SVAVQQPIDG SPRAVATDTG GIPEPLAAVP GAKLRLMCSF GGHIMPRPHD KSLTYSGGET RIVVVDRRAS
101: LSSLRSRLSS MLLNGRSFTL KYQLPSEDLD SLVTITTDED LENMIEEYDR AASSATATAT QRLRLFLFAN KLETAATMGS LLDGTKSDTW FVDALNQSGL
201: LPRGLSDSAA VNNTLVNLDE ASGGETEIQN LETNVGGENN KRGDLVANGV ISHQEMHMSS MPDSPMMEAA GSSIGSSSSS PSTSNLPPIR VRVSEDQRIE
301: EQLAQMTFSN MQTQRQFDDG VSLMANRPMM IPPGAMNDAA MAYNNAPGDG TAPASNGHVS PEDDRSELGV STGYRKPPLP MQPVTIPPRT VGGYGLTSPD
401: SVASDTSISS ATSFSKPMYY QDQPPALPRA PPVAQPETTS AQSSQVLPQT ENTSAQTTSH VLSQPGTYTT MDQQQQQPLA QQPFLHQGVQ YIPHPSQYIP
501: IYSHQQQNYP VYVMSVPQSQ QYIPAGTPPL YPNSKPGTNS RPEAAQNVYR AAPPQVIQLQ QQHQYMGYAG APQHSTNANA NYGTGAPQHS TNANANYGGP
601: FEYTNSPNET VYYHTQAPAA NTAIPLASPY QSMTPAAAAA ALADMSKQMA LDGGKQQQHM AASQPL

Arabidopsis Description

At3g18230 [Source:UniProtKB/TrEMBL;Acc:Q9LJQ7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.