Factsheet for Bra008633.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69461	Canola	plastid	98.76	98.76
AT5G16220.1	Thale cress	plastid	71.13	72.48
Bra006344.1-P	Field mustard	plastid	52.58	71.83
Zm00001d003965_P001	Maize	mitochondrion	8.45	37.27
HORVU3Hr1G008310.1	Barley	cytosol	9.48	32.17
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.67	29.23
VIT_14s0006g02490.t01	Wine grape	nucleus	30.1	28.13
Bra025209.1-P	Field mustard	mitochondrion	10.31	27.62
Bra032936.1-P	Field mustard	plastid	10.1	27.37
Bra018071.1-P	Field mustard	plastid	9.48	25.14
Bra038608.1-P	Field mustard	nucleus	9.9	24.74
Solyc02g086360.2.1	Tomato	cytosol	27.84	24.24
PGSC0003DMT400067817	Potato	cytosol	27.42	23.88
GSMUA_AchrUn_...	Banana	nucleus	18.76	23.58
Bra035855.1-P	Field mustard	cytosol	9.07	23.04
GSMUA_Achr10P...	Banana	nucleus	15.88	22.78
Bra016197.1-P	Field mustard	mitochondrion	7.63	22.29
Bra029559.1-P	Field mustard	nucleus	18.14	22.28
GSMUA_Achr2P07240_001	Banana	nucleus	24.33	21.45
Bra018513.1-P	Field mustard	nucleus	19.18	20.95
GSMUA_Achr8P18320_001	Banana	nucleus	21.86	20.46
Bra022508.1-P	Field mustard	nucleus	11.55	19.86
Bra000599.1-P	Field mustard	mitochondrion	10.72	19.62
EES00348	Sorghum	nucleus	26.39	19.31
Bra017462.1-P	Field mustard	cytosol, plastid	25.36	19.16
Zm00001d039916_P010	Maize	nucleus	25.98	19.12
Zm00001d008591_P001	Maize	mitochondrion	26.19	19.1
Bra022296.1-P	Field mustard	cytosol	23.3	19.09
Bra022297.1-P	Field mustard	nucleus	22.47	19.02
GSMUA_Achr1P21240_001	Banana	nucleus	23.51	19.0
Bra031918.1-P	Field mustard	nucleus	18.35	18.78
Os01t0139200-01	Rice	nucleus	25.57	18.48
Bra024899.1-P	Field mustard	nucleus, plastid	27.63	18.46
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	26.6	18.43
Bra024295.1-P	Field mustard	nucleus	16.29	18.2
Bra037596.1-P	Field mustard	nucleus	23.71	17.88
Bra009393.1-P	Field mustard	nucleus	16.91	17.3
TraesCS3A01G051800.1	Wheat	nucleus	24.95	17.19
TraesCS3B01G060500.1	Wheat	cytosol	23.3	17.07
TraesCS3D01G050900.1	Wheat	nucleus	23.3	17.04
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	24.33	16.79
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	25.15	14.42

Protein Annotations

EnsemblPlants:Bra008633.1	EnsemblPlants:Bra008633.1-P	EnsemblPlantsGene:Bra008633	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF14	PFAM:PF00564	SEG:seg
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002544A5F	UniProt:M4CWN6	MapMan:35.2	:

Description

AT5G16220 (E=4e-151) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA10:+:13173123..13175143

Molecular Weight (calculated)

52204.0 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.460

Length

485 amino acids

Sequence
(BLAST)

001: MTTVSSASAA VTECAKAVTP RCTNSGKLRV MCRYGGSIVS LPQTKSPRYV GGDTRIVAVP PSAETSVASL VSHLAVTLGI SYDFKVKYQL PDQELDSLIS
101: VETDEDVQIM MEEHGYLTCE SSIPKTRVRL FLFPSKTQGG ASQGDPAQCK AGEEAAGDVD WLGIGESNPT RDELTTQPVL QHPKTDTWFV DALKGVEMMQ
201: TGGNNSGSSA GSGGGICGQE SMMLETNSSF GSTSSSVSSS KLPPMKSTGE DNTSNSQVKF APIESLTSGN TAATPISSHE LPTSPHVSET KLSPNMYEPD
301: LNKPVAVSGY PQFLNQAQQQ QQQPIYVVYT GQPPYMTGNS PMPLPAYQHM NPIHYQLQPQ PYPVYYPVEQ YNSRYVQAPP VRHNTALNTH HVESPVARTS
401: SPLAPEFSSQ VYLPPKPVDS SSVQTSSEAG VSTTCKDDFI YNTDLDDDTA RAQLYKSQPP APIVSSELQT MMLTEALGQL NTHKG

Best Arabidopsis Sequence Match ( AT5G16220.1 )
(BLAST)

001: MTTVSSAFAT VAEGAKVVTP RWKKNERNGK LRVMCRYGGS IVSPPQTKSP RYVGGDTRIV AIPSSAETSF ASLVSHLTVT LKISYPFKVK YQLPDQELDS
101: LISVEADEDV QIMMEEHGYL SSESSIPQSR IRLFLFPLKS QQSNEAGASQ GDSDQCKVET DIDWLGIEES NKPIREELTQ PVLQHPKTEM WFVDALKSVE
201: MMQTRRTNSG TSGSGDGNGG ICGQESMMLE TNSSFGSTSS SVSSSNLPPI KSSGEDNIAN SQVKFAPIES VTSNDNSAVT PIPSHELPSH SHAFENKPSS
301: NLYVAELNRP VPVPISGYPP FMNQAQQQHI QVIYTGQPYI TGNSPMTLPA TAYHHTNHVY YQRPPQPYPI YYIPVEQYSS RHVQALPVKP STVLNYHQVD
401: SPVVRTSSPL APEFSSQVYP LSKPVDSSVQ TSSEATLNTT SRDAFIYNTD VDDDNDIAHA QIYKSQPPAP TLPSQY

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9LF06]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.