Factsheet for Solyc02g086360.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067817	Potato	cytosol	96.59	96.59
Zm00001d003965_P001	Maize	mitochondrion	10.05	50.91
VIT_14s0006g02490.t01	Wine grape	nucleus	43.81	47.01
HORVU3Hr1G008310.1	Barley	cytosol	12.03	46.85
GSMUA_AchrUn_...	Banana	nucleus	23.16	33.42
GSMUA_Achr10P...	Banana	nucleus	19.93	32.84
Solyc06g071750.2.1	Tomato	plastid	10.41	30.05
Solyc04g007460.2.1	Tomato	plastid	36.45	29.77
Bra006344.1-P	Field mustard	plastid	18.85	29.58
GSMUA_Achr8P18320_001	Banana	nucleus	27.29	29.34
Solyc05g008830.2.1	Tomato	nucleus	33.21	28.77
AT5G16220.1	Thale cress	plastid	24.42	28.57
CDX78676	Canola	plastid	22.8	28.29
GSMUA_Achr2P07240_001	Banana	nucleus	27.65	28.0
CDX70680	Canola	plastid	23.16	27.98
Bra008633.1-P	Field mustard	plastid	24.24	27.84
CDX69461	Canola	plastid	24.06	27.63
Solyc03g118870.2.1	Tomato	nucleus	30.52	26.69
Solyc02g079360.1.1	Tomato	nucleus	18.13	26.23
Solyc05g013530.2.1	Tomato	plastid	10.23	26.03
GSMUA_Achr1P21240_001	Banana	nucleus	27.47	25.5
Zm00001d039916_P010	Maize	nucleus	30.16	25.49
Zm00001d008591_P001	Maize	mitochondrion	30.16	25.26
EES00348	Sorghum	nucleus	29.8	25.04
Os01t0139200-01	Rice	nucleus	28.73	23.84
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	29.8	23.71
TraesCS3D01G050900.1	Wheat	nucleus	27.47	23.08
TraesCS3A01G051800.1	Wheat	nucleus	29.08	23.01
Solyc02g091670.1.1	Tomato	cytosol	11.13	22.96
TraesCS3B01G060500.1	Wheat	cytosol	27.29	22.96
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	27.47	21.76
Solyc04g076820.1.1	Tomato	plastid	17.41	20.46
Solyc01g106320.2.1	Tomato	extracellular	17.95	20.28
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	29.62	19.5

Protein Annotations

EnsemblPlants:Solyc02g086360.2.1	EnsemblPlantsGene:Solyc02g086360.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF14	PFAM:PF00564	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	UniParc:UPI00027677B2	UniProt:K4BBE4	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2:-:49023208..49026271

Molecular Weight (calculated)

59562.9 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.329

Length

557 amino acids

Sequence
(BLAST)

001: MDPPSPAPPS TATDSLLDLP PLPTPTTKVR LLCSYGGQIV QRPHDKTLCY AGGENRVVAV DRRTTISSLS ALLAHLSRTL YGNRPFYLKY QLPDEELDSL
101: ISVTTDEDLQ NMLEEHDRTT TASVTSSRIR LFLFPVKPES LGSALLDSKA DSWFSDALNN TWIARRGQST DSGFGHELIG FENLGGSNSV VSSEGQGDNL
201: SAIGGSAGDA KQTLDFGGGS VPESMVLETS SSFGSTSSSI SMSNMPAIGV QAEDGGVNLQ DKRVRVPSSS ASIESDSIMG GAGFQPKVGI HQEPLIQVMS
301: SMASHSLFEA EGSNASPSLI QTPKMVQVSG YPLPQTLDGK QPQPGIQYVH GGACYVPHYP SGPLPVSSCY PFYQVPMQQP QQTPYPLNQQ YPIYLVPVQQ
401: MQSHSMSVLP NINHAAVMAS NRPPLHSQSV INPPSVAYKE VMAAQSVPES GPKVYTTVPT ASLPISAPSQ TQQQYTVLPE PQLTSQPVST ASVPAANDAN
501: EFDDDLAYNQ IYKSQPPPPS FISQCQTITK GAAVLLSESS MQMHSNNVMN QAPSHPQ

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.