Factsheet for Os01t0139200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0269200-01
Os02t0828566-01
Os03t0422702-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01190.1	Os02t0269200-01	AT3G16120.1	21798944
AT2G01190.1	Os02t0828566-01	AT5G08330.1	21798944
AT2G01190.1	Os03t0422702-00	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G008310.1	Barley	cytosol	19.08	89.51
Zm00001d003965_P001	Maize	mitochondrion	14.31	87.27
Zm00001d039916_P010	Maize	nucleus	80.03	81.49
EES00348	Sorghum	nucleus	80.48	81.45
Zm00001d008591_P001	Maize	mitochondrion	79.58	80.3
TraesCS3A01G051800.1	Wheat	nucleus	78.24	74.57
TraesCS3D01G050900.1	Wheat	nucleus	72.28	73.15
TraesCS3B01G060500.1	Wheat	cytosol	71.98	72.96
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	78.39	62.17
GSMUA_AchrUn_...	Banana	nucleus	35.47	61.66
GSMUA_Achr10P...	Banana	nucleus	28.61	56.8
GSMUA_Achr8P18320_001	Banana	nucleus	41.43	53.67
GSMUA_Achr2P07240_001	Banana	nucleus	42.62	52.0
GSMUA_Achr1P21240_001	Banana	nucleus	44.41	49.67
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	51.12	49.0
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	48.29	46.09
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.16	36.54
CDY36115	Canola	cytosol, nucleus, vacuole	14.01	36.29
VIT_01s0011g04140.t01	Wine grape	nucleus	36.96	35.58
CDY24410	Canola	cytosol	13.56	35.27
VIT_17s0000g03180.t01	Wine grape	nucleus	33.23	34.95
KRH35888	Soybean	nucleus	36.07	34.23
PGSC0003DMT400015310	Potato	nucleus	32.94	33.54
Solyc05g008830.2.1	Tomato	nucleus	32.04	33.44
KRH39133	Soybean	cytosol	33.23	33.33
KRG90906	Soybean	nucleus, plastid	35.77	33.29
KRH48572	Soybean	cytosol	31.74	33.23
CDY25942	Canola	nucleus, plastid	30.85	32.96
CDY41073	Canola	nucleus, plastid	30.7	32.65
Bra017462.1-P	Field mustard	cytosol, plastid	31.15	32.55
Solyc04g007460.2.1	Tomato	plastid	33.08	32.55
AT1G25300.1	Thale cress	cytosol, nucleus, plasma membrane	13.11	32.35
Solyc03g118870.2.1	Tomato	nucleus	30.55	32.18
PGSC0003DMT400014442	Potato	nucleus	32.79	32.12
KRH38173	Soybean	nucleus	31.0	31.9
CDY68695	Canola	nucleus	25.63	31.27
Bra024899.1-P	Field mustard	nucleus, plastid	33.83	31.27
AT2G01190.1	Thale cress	nucleus, plastid	33.23	30.97
CDY17690	Canola	nucleus, plastid	33.08	30.66
VIT_14s0006g02490.t01	Wine grape	nucleus	23.7	30.64
Bra006344.1-P	Field mustard	plastid	15.8	29.86
Bra022297.1-P	Field mustard	nucleus	25.04	29.32
CDY40994	Canola	cytosol	24.89	29.3
CDY24442	Canola	cytosol	24.89	29.25
AT3G18230.1	Thale cress	nucleus, plastid	28.91	29.13
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	18.33	29.08
Bra037596.1-P	Field mustard	nucleus	27.72	28.93
CDY66514	Canola	nucleus	27.72	28.88
Solyc02g086360.2.1	Tomato	cytosol	23.84	28.73
CDX92217	Canola	cytosol	25.04	28.67
Bra022296.1-P	Field mustard	cytosol	25.19	28.55
PGSC0003DMT400067817	Potato	cytosol	23.7	28.55
AT5G16220.1	Thale cress	plastid	19.52	27.52
CDX70680	Canola	plastid	18.63	27.11
CDX78676	Canola	plastid	17.88	26.73
Bra008633.1-P	Field mustard	plastid	18.48	25.57
CDX69461	Canola	plastid	18.48	25.57
Os11t0444700-01	Rice	cytosol	8.05	24.11
Os11t0444900-01	Rice	cytosol, plastid	7.6	23.61
Os05t0427100-01	Rice	cytosol	11.33	20.77
Os02t0809100-00	Rice	cytosol, nucleus, plastid	8.2	10.36

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.2	EntrezGene:4325473	ProteinID:BAD61300.1	ProteinID:BAF03890.2	ProteinID:BAS70304.1
ProteinID:EAZ10471.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	InterPro:IPR000270	EnsemblPlantsGene:Os01g0139200
EnsemblPlants:Os01t0139200-01	InterPro:PB1_dom	PFAM:PF00564	PANTHER:PTHR31066	PANTHER:PTHR31066:SF27	UniProt:Q5ZDH9
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0000450510	RefSeq:XP_015616404.1	SEG:seg	:

Description

Octicosapeptide/Phox/Bem1p domain containing protein. (Os01t0139200-01);Octicosapeptide/Phox/Bem1p domain containing protein. (Os01t0139200-02);Conserved hypothetical protein. (Os01t0139200-03)

Coordinates

chr1:-:2084490..2087203

Molecular Weight (calculated)

70372.8 Da

IEP (calculated)

5.806

GRAVY (calculated)

-0.530

Length

671 amino acids

Sequence
(BLAST)

001: MDSVPAAGVG VGGGGAGAGY PESTESSPRS RGGDSWDEPF PSSAAAAAAA AGGGRLRLMC SFGGRIVPRP TDKSLCYLGG ETRIVAVERN ASLADVHARL
101: SRSLLGGQPF TLKYQLPNED LDSLISVSTD EDLDNLVDEY DRIAATSSGG GSSRTSRIRL FLFPAKPESS SSLGSLLDDS SKSESWFVDA LNSAISGSLD
201: GIPRGISTDS ASVNCLLGLE DDSSTHSRGG PPNSSPAEEQ RANQQKLAAA AAVAAARHPH DVQSVPDSPM IDKNSSFGST SSAPSLSNLP PIRVRPEDRP
301: PDSRLAPQVP VEDHFAQMGI SDQPVQPVIG GYMQPPPQVP IPNMAVPSIS PSDASSRVFS DDDKSDHGGG GGRKPQPPKP EVPPVADPTN RAMYYNDRSP
401: PAELKRDMPV GTDAASYRVP VPAQDAAAAA AAAAAAAQQP PAGYVYAQMH APPPQQQPPP PQQQQPVPQQ YVTAQNQHFI HNPATGTFIP IQSYYHHPVP
501: QQAPQPPMPQ PVPQPQQSHA FDPNTGMYYI PMRTNAPQAY SMPPGAAAVP PPTLVDTTPK PTVPIPQMAV KQPELQQPGL YRTTAAPTPV PASNAPAYAG
601: MGYHHVIQTH HHPAPQPAAT VAGNFGYDYG DPTRAQVFYS QAAAPPTLPP QYQPMGSPDA GQADLKQARA S

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.