CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90619
KRH03222
KRH09878
KRH23441
KRH36141
KRH54323
KRH63619

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01190.1	KRH09878	AT3G16120.1	21798944
AT2G01190.1	KRH23441	AT3G16120.1	21798944
AT2G01190.1	KRH03222	AT3G48240.1	21798944
AT2G01190.1	KRH54323	AT3G48240.1	21798944
AT2G01190.1	KRH63619	AT3G48240.1	21798944
AT2G01190.1	KRG90619	AT5G08330.1	21798944
AT2G01190.1	KRH36141	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003965_P001	Maize	mitochondrion	9.2	54.55
KRH35888	Soybean	nucleus	55.98	51.63
KRG90906	Soybean	nucleus, plastid	55.21	49.93
VIT_01s0011g04140.t01	Wine grape	nucleus	52.61	49.21
KRH57272	Soybean	cytosol	6.29	44.57
Solyc05g008830.2.1	Tomato	nucleus	43.25	43.86
HORVU3Hr1G008310.1	Barley	cytosol	8.9	40.56
CDY25942	Canola	nucleus, plastid	37.73	39.17
GSMUA_AchrUn_...	Banana	nucleus	23.16	39.12
CDY41073	Canola	nucleus, plastid	37.73	38.99
Bra017462.1-P	Field mustard	cytosol, plastid	38.34	38.94
KRH39133	Soybean	cytosol	38.96	37.97
AT2G01190.1	Thale cress	nucleus, plastid	41.72	37.78
Bra024899.1-P	Field mustard	nucleus, plastid	41.72	37.47
CDY17690	Canola	nucleus, plastid	41.56	37.43
KRH48572	Soybean	cytosol	36.2	36.82
GSMUA_Achr8P18320_001	Banana	nucleus	28.83	36.29
KRH29762	Soybean	plastid	6.29	34.45
GSMUA_Achr10P...	Banana	nucleus	17.79	34.32
GSMUA_Achr2P07240_001	Banana	nucleus	28.22	33.45
Zm00001d008591_P001	Maize	mitochondrion	32.52	31.88
Zm00001d039916_P010	Maize	nucleus	32.21	31.87
EES00348	Sorghum	nucleus	31.9	31.37
KRH69636	Soybean	plastid	10.12	31.13
Os01t0139200-01	Rice	nucleus	31.9	31.0
KRH45586	Soybean	plastid	8.59	30.77
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	33.13	30.73
KRH74522	Soybean	nucleus	10.74	30.3
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	32.52	30.29
KRH41951	Soybean	nucleus	19.17	29.69
GSMUA_Achr1P21240_001	Banana	nucleus	27.3	29.67
KRH54323	Soybean	cytosol, nucleus, plastid	8.44	29.57
TraesCS3A01G051800.1	Wheat	nucleus	31.9	29.55
KRH26304	Soybean	nucleus	11.81	29.5
KRH63619	Soybean	plastid	8.74	29.38
KRH03222	Soybean	cytosol	8.74	28.79
KRH06059	Soybean	nucleus	11.81	28.73
TraesCS3B01G060500.1	Wheat	cytosol	28.99	28.55
TraesCS3D01G050900.1	Wheat	nucleus	28.99	28.51
KRH49930	Soybean	nucleus	18.25	28.07
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	32.52	25.06
KRH10652	Soybean	cytosol	16.87	24.66
KRH21700	Soybean	nucleus	16.56	24.55
KRH42038	Soybean	cytosol	17.64	24.16
KRH49860	Soybean	nucleus	16.87	23.26
KRH16903	Soybean	nucleus	11.81	21.75
KRH72507	Soybean	cytosol, nucleus, peroxisome	11.96	21.73

Protein Annotations

EMBL:ACUP02005681	EnsemblPlants:KRH38173	EnsemblPlantsGene:GLYMA_09G116000	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF3	PFAM:PF00564
ProteinID:KRH38173	ProteinID:KRH38173.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000295534A
UniProt:K7LD90	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:25610952..25614016

Molecular Weight (calculated)

71637.6 Da

IEP (calculated)

6.561

GRAVY (calculated)

-0.632

Length

652 amino acids

Sequence
(BLAST)

001: MPNKKDTDGY HGCPKNSFPV SINFNRLYIK AHSCSKEPQP NLVPMEAQPT PPPDPVDSSP HSWDEPCPPL SSAKLRLMCS YGGHIVPRPH DKSLCYVGGD
101: TRIVVVPRHV TLSELSTRLS KSFLHARPFV LKYQLPSEDL DSLVSVTTDE DLENMIDEYD HRSGNNNNNK PSSRIRLFLF PSQPDSVHGP AGLGSVKSEE
201: WLSGSLDGGL SESASVNCIL GLDDEVASAS AAANSNGNSG KVFKDVVSDS PMLESNSSFG SGSSVPPNLP PIKVHVEIEE QFAQLGVGQK QQEDEGFVAP
301: VPVMEFSTNR LVSDDERSDH GVPLGHRKSP TPPLQPQPHQ FQQKSPHGVV DLPSPDSLSS DSSLSNAMLR PKPAIYQDQV QIQYGSSQVP SNASVDPKLN
401: VTDQQGWIQM QQHVQEAGYV LQPQFDQLPL PQQHQTQPPQ QQHQPQQYIH NTHLIHHTLS GSVPIPASYY PVCQQQLHTQ HLHHLDQQYP VYYVQARQAQ
501: PYNLSVQLAN AAESATTMPS SQSQNQPSSA AYNSTRNPNF EMAAGACRTA PATPQLVQVS SSKHQQQYVA HSQIYHRHPQ SMPPKSAVPA NYAYNYADPA
601: LAQVFYSQPL APFMPSHYQT MTAASVMRTE VSAKLPSDSM KKPQQVTTSQ PL

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.