Factsheet for Bra017462.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41073	Canola	nucleus, plastid	97.04	98.73
CDY25942	Canola	nucleus, plastid	87.85	89.81
Bra024899.1-P	Field mustard	nucleus, plastid	79.59	70.39
Zm00001d003965_P001	Maize	mitochondrion	9.5	55.45
VIT_01s0011g04140.t01	Wine grape	nucleus	50.78	46.77
HORVU3Hr1G008310.1	Barley	cytosol	10.12	45.45
KRH35888	Soybean	nucleus	49.84	45.26
KRG90906	Soybean	nucleus, plastid	49.38	43.97
GSMUA_AchrUn_...	Banana	nucleus	25.55	42.49
Solyc05g008830.2.1	Tomato	nucleus	40.65	40.59
KRH38173	Soybean	nucleus	38.94	38.34
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.26	37.69
GSMUA_Achr10P...	Banana	nucleus	19.78	37.57
Bra032936.1-P	Field mustard	plastid	9.97	35.75
GSMUA_Achr8P18320_001	Banana	nucleus	28.66	35.52
GSMUA_Achr2P07240_001	Banana	nucleus	29.91	34.91
Bra025209.1-P	Field mustard	mitochondrion	9.5	33.7
Bra022297.1-P	Field mustard	nucleus	30.06	33.68
Bra022296.1-P	Field mustard	cytosol	30.84	33.45
Bra037596.1-P	Field mustard	nucleus	32.71	32.66
Zm00001d039916_P010	Maize	nucleus	32.71	31.87
EES00348	Sorghum	nucleus	32.87	31.82
Bra038608.1-P	Field mustard	nucleus	9.5	31.44
Zm00001d008591_P001	Maize	mitochondrion	32.55	31.43
Os01t0139200-01	Rice	nucleus	32.55	31.15
GSMUA_Achr1P21240_001	Banana	nucleus	28.66	30.67
Bra029559.1-P	Field mustard	nucleus	18.85	30.63
Bra018071.1-P	Field mustard	plastid	8.72	30.6
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	33.33	30.57
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	32.09	29.3
TraesCS3A01G051800.1	Wheat	nucleus	31.78	28.98
TraesCS3D01G050900.1	Wheat	nucleus	29.75	28.81
Bra035855.1-P	Field mustard	cytosol	8.57	28.8
Bra006344.1-P	Field mustard	plastid	15.73	28.45
Bra016197.1-P	Field mustard	mitochondrion	7.32	28.31
Bra018513.1-P	Field mustard	nucleus	19.16	27.7
TraesCS3B01G060500.1	Wheat	cytosol	28.35	27.49
Bra008633.1-P	Field mustard	plastid	19.16	25.36
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	31.62	24.0
Bra022508.1-P	Field mustard	nucleus	10.12	23.05
Bra000599.1-P	Field mustard	mitochondrion	9.35	22.64
Bra031918.1-P	Field mustard	nucleus	16.67	22.57
Bra009393.1-P	Field mustard	nucleus	16.04	21.73
Bra024295.1-P	Field mustard	nucleus	13.71	20.28

Protein Annotations

EnsemblPlants:Bra017462.1	EnsemblPlants:Bra017462.1-P	EnsemblPlantsGene:Bra017462	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF3	PFAM:PF00564
PFscan:PS51745	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002542356	UniProt:M4DLT1
MapMan:35.2	:	:	:	:	:

Description

AT2G01190 (E=7e-207) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA09:-:15598829..15600849

Molecular Weight (calculated)

69742.3 Da

IEP (calculated)

6.121

GRAVY (calculated)

-0.670

Length

642 amino acids

Sequence
(BLAST)

001: MEPPPPSLSS TVVPAATSSI PPPPPPHVPS SYPESLDSSP KSRTTDAWDD LPPPAGGASS KLRLMCSYNG HILPRPHDKS LCYMGGDTRI IALDRTSSLS
101: SLITRLSNTL LNGRSFTLKY QLPSEDLDSL ISVTTDEDLD NMIEEYDRTI SSAKPSRLRL FLFTAKPEAT QSMGQILESS AKSDDWFLNA LNRGSDVNRL
201: LGLDDAGDKD DDCKHQQQKQ QIQQPPPPPP PPQQGGQDVH NLPDSPMLDT SSSFGSTSSS PSLANLPPIR VHVEEAKGMQ DQRLGIEEQF ARFNVGNKLQ
301: DDGFAAISSP PPMPVTITLP AAPVNATTVS SEVFSDDGAP AGYRKPPTPR SQPTHQVKSN SGGHEMPSPD SVSSDSSMNN SVFHQRPSVY QEPVSQMPSC
401: SSTVVTGLIN PSDPNTLLSH NQNQNRNQDS GYILHPQQQQ FIHAPQYLHH HPSTGLPVQS YIQVYPSQPQ QSFHMHPSQL DHQPYPFYYA TAPVPPKPYN
501: IPLTQSGSVS DSLGSLPSSH PQTLPNSTMM APPPNNHLRN TPQATGGAQI VHQVPPISQQ QFMGYSQIHH PPQSGSAGIP NYGYEYVENA PKQVYYTQQM
601: GHAQYQTMTG PPPAMVLPDG SPVAAKLPAE NMTQQIQSSH PL

Best Arabidopsis Sequence Match ( AT2G01190.1 )
(BLAST)

001: MEPPPSSLSS TAVASTSISA ATAPVPPPLP PHVTSSYPES LDSSPRSRTT DGWDDLPAPS GGGGGGGGSA VSSKLRFMCS YGGHILPRPH DKSLCYMGGD
101: TRIVVVDRNS SLPSLIARLS NTLLDGRSFT LKYQLPSEDL DSLISVTTDE DLDNMIEEYD RTISASNSTK PSRLRLFLFT SKPEATQSMG QILESSAKSD
201: DWFLNALNSA GLLNRGFSDS DTNVNRLLGL DDALALRSNS GDNNNRDGDD GSVKSAKQQQ PPPPQQQEQQ QGGQDVNCLP DSPMLDTSSS FGSTSSSPSL
301: ANLPPIRVHV EEPGGVRTLP DQRNLGIEEQ FARFNVGNKH QLHDDGFAAI SSPPPMPVTI ALPAAPVTAA TVSNEFQARV YSDDERSDHG VQAGYRKPPT
401: PRSQPQNLPP QQAHQLKSNS GGGHELPSPN SVSSDSSMSN PMFHQRPSVY QEPIAQIPSG STVVTGMINP SDPSTLLSQH QNQDPAYILH PQFEQQSAQS
501: QPQQQFIHTA APPQYIHHHP SSGLPVPTYI QVYPSQQPQQ SFHQHAGRLD QQPYPVYYVT APVPPRPYSM PVPQSPSVSD AAGSIPSNHP NSTMMPPPPN
601: NHMRSVSSGK PEMGQAGVYT TAPGVGGAQM VHQIPTNQQQ FMGYSQIRHP PQSGSAGNPN YGYEYVDNAH TQIYYTQPMG HAQYQTMTGP PPAMVMPDGS
701: AAAKLPAENM TQQIRSSQPL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU48]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.